Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g04809 ATGGATGTTCTTTGCAGTGACAAAACTGGAACTCTCACCCTTAATAAGCTTTCCGTGGACAAGAACTTGATTGAGGTGTTTCCTGCTGGCTTGGACAAGGATGCCATTGTCTTATATTCTGCCAGAGTTTCTAGGACTGAAAACCAAGATGCCATTGATGCATCAATTGTGGGAATGTTGGGTGACCCCAAGGAGGTATTATGA 204 0.4363 MDVLCSDKTGTLTLNKLSVDKNLIEVFPAGLDKDAIVLYSARVSRTENQDAIDASIVGMLGDPKEVL. 68
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g04809 67 ProSitePatterns E1-E2 ATPases phosphorylation site. 7 13 IPR018303 -
Seca11g04809 67 Gene3D - 2 16 IPR023214 -
Seca11g04809 67 FunFam Phospholipid-transporting ATPase IC 2 14 - -
Seca11g04809 67 PANTHER CALCIUM-TRANSPORTING ATPASE 1 65 - -
Seca11g04809 67 Gene3D - 17 65 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g04809 Seca-Chr11 136904347 136905248 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g04809 1 65 Primary Pumps ATPases AT3G42640 83.077 9.77e-32 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g04809 K01535 - gmx:100798717 116.316