Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g04804 ATGGCCAAAGAGATTCTTGTTTTGAGGAGGCATGATCACCCAAATGTTCTAAAGCTTGAGGGCTTAGTTACTTCAAGAATATCATCGAGTCTTTATTTGGTTTTTGAGTATGTGGAACACGATCTTGCTGGCCTTGCAGCTCACCTTGGTGTCAAATTCTCTGAGCCTCGGTTGTTGTGA 180 0.4278 MAKEILVLRRHDHPNVLKLEGLVTSRISSSLYLVFEYVEHDLAGLAAHLGVKFSEPRLL. 60
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g04804 59 FunFam Putative serine threonine-protein kinase 1 44 - -
Seca11g04804 59 ProSiteProfiles Protein kinase domain profile. 1 59 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca11g04804 59 SUPERFAMILY Protein kinase-like (PK-like) 3 56 IPR011009 -
Seca11g04804 59 Gene3D Phosphorylase Kinase; domain 1 1 52 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g04804 Seca-Chr11 136842466 136842645 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g04804 3 58 Core Cell Cycle Gene Families AT5G10270 34.286 6.25e-10 50.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Seca11g04804 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g04804 K08819 - gmx:100789359 99.7525