Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g04796 ATGGAATTGGAAACCTGTAATACACATTCATTTGTGCATCTTTTGATGCTCTGTTTGTTATTATGCTTTATGGTGACAATTGAAGGTTCTAAAGATAAGGTCTCAGCCATGTATGTGTTTGGAGACTCTACAGTAGACCCAGGGAATAATAACTACATAAAGACACCTTTCAAGAGCGATTTTCCACCCTATGGTAGAGATTTTGCCAACCAAGCTCCCACTGGAAGGTTCACAAATGGAAAGCTTGGCACTGATTTTATTGCTTCATATCTAGGCTTGAAAGAGTTGTTGCCGCCATATTTGGATCCAAATCTCAGCGATGAAGAACTCATAACAGGAGTCAGTTTTGCCTCTGCTGGTTCTGGTTTTGACCCCTTGACACCAACTATGAGTAATGTAATTCCAATAGCAAAGCAGTTGGAATATTTCAAAGAATGCAAAAAGACGCTGGAGGGTAAGCTTGGTAAGCAAAGAACTGAAAAACATATGAACGATGCTTTATTTTTCATCAGCGCGGGAACAAATGATTTCGTCATTAATTATTTTACGGTGCCAATACGAAGAAGAAGCTACACTCTCTTGAACTACGGACACTTCTTGCTTCAACATATAAAAGACTTCATACAGAATTTATGGTCAGAAGGTGCACGAAAAATCGCTTTCGTTGGACTACCTCCAATGGGATGTTTACCAATCATGATCACCTTCAATTCCGGCAATGCCTTTCTTGAACGTGGTTGTGTGGACAAGTTTTCCGCTGTGGCAAGAGATCACAATCTCATGCTTCAACATGAATTGTTCTTGATGCAACTGAATTTCTCTAATCCTCATGCTGCTAAGATCTCTTACATCGACACATATGGACCCTTGGCCAATATGATTCAAGGACATGAAAATCTTGAGTTTGATGAGGTTGATAGTGGCTGTCGTGGAAGTGGTTACATCGAAGCAACGTATTTGTGTAACAAGGTTTCGGTTGTGTGCTCTGATCCATCAAAGTATGTATTTTGGGATTCAATGCACCCTACGGAGAAGGCATACCATAACTTATTCATCGCTGCCCGTCCTACCATTGATGCCCTTATCAACGGCTAG 1095 0.4073 MELETCNTHSFVHLLMLCLLLCFMVTIEGSKDKVSAMYVFGDSTVDPGNNNYIKTPFKSDFPPYGRDFANQAPTGRFTNGKLGTDFIASYLGLKELLPPYLDPNLSDEELITGVSFASAGSGFDPLTPTMSNVIPIAKQLEYFKECKKTLEGKLGKQRTEKHMNDALFFISAGTNDFVINYFTVPIRRRSYTLLNYGHFLLQHIKDFIQNLWSEGARKIAFVGLPPMGCLPIMITFNSGNAFLERGCVDKFSAVARDHNLMLQHELFLMQLNFSNPHAAKISYIDTYGPLANMIQGHENLEFDEVDSGCRGSGYIEATYLCNKVSVVCSDPSKYVFWDSMHPTEKAYHNLFIAARPTIDALING. 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g04796 364 Gene3D SGNH hydrolase 26 360 IPR036514 -
Seca11g04796 364 CDD SGNH_plant_lipase_like 36 364 IPR035669 -
Seca11g04796 364 PANTHER GDSL ESTERASE/LIPASE EXL3 21 350 - -
Seca11g04796 364 SUPERFAMILY SGNH hydrolase 165 350 - -
Seca11g04796 364 Pfam GDSL-like Lipase/Acylhydrolase 38 351 IPR001087 GO:0016788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g04796 Seca-Chr11 136657080 136662222 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g04796 15 350 Pollen Coat Proteome AT1G75910 33.237 2.60e-56 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g04796 - - gmx:100804919 597.816