Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g04793 ATGTCTGTCCCTTCTTCTGCTTCAACTTCTTTTCCATTTCTATTCTGTTCTTTGTTTGTTTTCTTCATTTTGACTGTAACTTCACCATGCTTAGCCATACTTAACAAAACTAACCGCACCCCTCGCCAGCTCTCAGTTGATTACTATGCCAAATCTTGCCCCCAGGTAGAACAGCTTGTTGGCTCAATCACCTCTCAACAATTCAAAGAATCACCTGTTTCTGGCCCTGCTACCATTCGCCTCCTCTTCCATGATTGCTTTGTAGAAGGTTGTGATGCTTCAATTTTAATAGAATCAAAGCCTGGGAGCAAGGAGTTGGCAGAGAAAGATGCAGAGGATAATAGAGATTTGAGAGTGGAAGGTTTTGAGACCATAAGGAAGGCTAAGGAGGTAGTGGAGAGAAAGTGCCCAGGTGTTGTGTCCTGTGCAGACATTCTTGCAATTGCAGCCAGAGATTATGTACACCTGCAGGCAGGAGGGCCCTATTACCAAGTGAAGAAGGGAAGATGGGATGGAAAGATATCAATGGCATCAAGAGTGGGGTCCAACATCCCTCGTGCAAACTCCACCATTGATCAACTCATCAAACTCTTCAACTCAAAGGGCTTAACCATACAAGACATGGTTGCACTTTCTGGTGCCCACACAATTGGGTTTGCCCATTGCAAGAACTTTGTGACCCGTCTCTACAATTACCAGGGCAAGGGTCAACCCGACCCAAATATGGACCCCAAACTGCTACATGCTTTGAGATTGTATTGTCCAAACTATGGTGGAAACTCAGACATTGTTGCCCCATTTGATGCTACTACCCCTTTCATATTTGACCATGCCTATTATGGTAATTTGCAGAACAAAATGGGTTTGCTAGCCTCTGACCAGGCTTTGGCTTTGGATCCACGAACCAAACCACTGGTTCAAGATCTTGCAAAGGATAAGCAAAAGTTTTTTCAAGCTTTTGTAGCTGCTATGGACAAATTGAGTTTGGTGAAAGTGGTAAGAGGGAAAAGGCATGGGGAGAAAAGAAGAGATTGTAGCATGCATATGTGA 1050 0.441 MSVPSSASTSFPFLFCSLFVFFILTVTSPCLAILNKTNRTPRQLSVDYYAKSCPQVEQLVGSITSQQFKESPVSGPATIRLLFHDCFVEGCDASILIESKPGSKELAEKDAEDNRDLRVEGFETIRKAKEVVERKCPGVVSCADILAIAARDYVHLQAGGPYYQVKKGRWDGKISMASRVGSNIPRANSTIDQLIKLFNSKGLTIQDMVALSGAHTIGFAHCKNFVTRLYNYQGKGQPDPNMDPKLLHALRLYCPNYGGNSDIVAPFDATTPFIFDHAYYGNLQNKMGLLASDQALALDPRTKPLVQDLAKDKQKFFQAFVAAMDKLSLVKVVRGKRHGEKRRDCSMHM. 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g04793 349 FunFam Peroxidase 47 194 - -
Seca11g04793 349 ProSitePatterns Peroxidases proximal heme-ligand signature. 207 217 IPR019793 -
Seca11g04793 349 Pfam Peroxidase 64 312 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca11g04793 349 PANTHER - 31 347 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca11g04793 349 FunFam Peroxidase 185 327 - -
Seca11g04793 349 SUPERFAMILY Heme-dependent peroxidases 43 347 IPR010255 GO:0004601|GO:0006979|GO:0020037
Seca11g04793 349 Gene3D - 47 347 - -
Seca11g04793 349 PRINTS Plant peroxidase signature 282 299 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca11g04793 349 PRINTS Plant peroxidase signature 266 281 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca11g04793 349 PRINTS Plant peroxidase signature 159 174 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca11g04793 349 PRINTS Plant peroxidase signature 77 97 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca11g04793 349 PRINTS Plant peroxidase signature 322 335 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca11g04793 349 PRINTS Plant peroxidase signature 53 72 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca11g04793 349 PRINTS Plant peroxidase signature 120 133 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca11g04793 349 PRINTS Plant peroxidase signature 139 149 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca11g04793 349 PRINTS Plant peroxidase signature 206 218 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca11g04793 349 ProSitePatterns Peroxidases active site signature. 75 86 IPR019794 GO:0004601
Seca11g04793 349 ProSiteProfiles Plant heme peroxidase family profile. 43 349 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca11g04793 349 Gene3D Peroxidase, domain 2 185 327 - -
Seca11g04793 349 PRINTS Haem peroxidase superfamily signature 159 171 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca11g04793 349 PRINTS Haem peroxidase superfamily signature 140 157 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca11g04793 349 PRINTS Haem peroxidase superfamily signature 207 222 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca11g04793 349 PRINTS Haem peroxidase superfamily signature 268 283 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca11g04793 349 PRINTS Haem peroxidase superfamily signature 75 89 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca11g04793 349 CDD secretory_peroxidase 43 346 IPR033905 GO:0004601|GO:0042744
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g04793 Seca-Chr11 136618444 136621812 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g04793 17 349 Peroxidase AT2G34060 62.130 3.10e-158 445
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g04793 K00430 - gmx:100777463 601.282