Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Seca11g04785 | ATGCATTTCCCATCCACTATTCCTCTTTGGCTCTCCTATTTATTCATCTCCTTTGTTCTCACCAATGGCTACCAAGCTGAGCCTACAAATGGAGACAACAAAGTTATATCTATTGGTGCAATGATTGATGTTAACTCTCGTATTGGGAAAGAACAACGAGTAGCCATGGATATTGCAGCTCAAAGATACAACAATACTTCAAAAACCCACAAGCTGGCTCTTCATTTTCAAGAACCCACCAAGGATCCCTTCAGAGCCACTTCTCTTGCTGAAGAGATGATTAAAACTCAAAAGGTGCAAGTGATTGTAGGGATGAACACATGGGCAGAAGCAGCTTCAGTAGCTGAATTAGTACACCAAACTCGAGTTCCTATCATATCCTTTGTAGCACCAACCATTACCCCACCATTGATGCAAATTCGGTGGCCTTATTTGGTAAAAATGGCTAACAATGGTACTGCATATGTAAAATGCATTGCAGATATGGTGCATGCTTATGGTTGGCAAAAATTAGTAGCCATCTATGAAGATGATACCTATGGTGGAGATTTTGGGATGCTAGCACTGCTATCTGAGGCCCTCCAAGATGTTGGTTCAATGATTGAATACCGTTTAGCTCTGCCATCACATTCTTATCTGCCTAATCCTGGAGAGTTTATTCAAGAAGAGCTGTCTAAGTTAACAAAAAATACACCATCTAGAGTGTTCATTGTTCTTCAATCATCATTAGATATGGTGATTCATTTGTTCAGAGAAGCTTCACAAATGGGACTTGTGGATAAAGAATCAGCTTGGATAATCCCAGAGAGCATAACTAATTTGTTGGACTCTGTCAATAAGTCTGGTACTTCCTATATGCAAGGAGCTTTAGGAATCAAGACATACTTCTCTGAAAATAGCAGTGAGTATCAACATTTTGAGGCTCAATTCAGGAGAACTTTTCGGTACAAGCATCCTGAGGAAGGTGATAGCAACCCTGGATTTTATGCTCTACAAGCATATGATAGCATTAGAATTGTTGCACAAGCAGTGGACAGAATGGCCAGTGGCAATGGTAGTGGGAGAGAGACTTTATTAAGAGAAATATTGGCTAGCAATTTCCTTGGTTTAAGTGGAAAAATTCAATTTGAATCACTTCAGCTCTTGCAGAATCCTATCTTGAGGATTGTAAATGTAAATGGGAAGAGTTACAGAGAATTAGACTTTTGGACTCTAGAAAGTGGGTTCATTCCCACAGAACAAGGTGGAAATAGTACTTTTAGGAACACAGAAAGTTTGAGTGGTGTAGTGATTTGGCCTGGAAAAACAACTAGAGTTCCAAAGGGCTGGAATATGCCTACTAAACAAAATCCAATGAAAATTGCAGTTCCTGGAAGAACAGCATTTTCCAAGTTTGTCAAGGTTGATTATGATGAGCATGAAAAGCGATATAAGTATTCCGGATTTTGCATTGAAATTTTTGAGGAGGTGTTAGGACTTTTGGAGTATGATCTGCCATATGAATATTATCCCATCAATGGGACCTATCCTGATCTGGTTCAACTTGTGTATAACAAGACTTATGATGCTGTTGTTGGCGACATGACCATACTGGCAGAGAGATTGCAATATGTGGATTTCACTGTGCCATATACAGAATCAGGATTGTCAATGGTAGTTACAGAAAGGTCCCAAGAATCCACATGGATGTTTATGAAGCCCTTCACCTGGCAAATGTGGGCAGTAACTGGTGCCATCTTGATTTACACAATGTTAGTAGTGTGGTACTTGGAGAGGGATTCCAATCCAGAGTTTGAAGGCAATTGGAAAGTGCAGATCAGCACTGCTCTTTGGTTTACTTTCTCCTCTCTATTCTTTGCTCATAGGGAGAAAATGTATAGCAACTTATCTCGTGTAGTCATGGTATCATGGCTCTTTCTAGTTTTGATTCTAAACTCAAGCTACACTGCGAGTCTTTCTTCAATGCTCACAGTTCAACAACTGAAACCAAATGTCACAGACATTGAGTGGCTGAAGAAGAACAACATGAAAATTGGTTGTGATGGAGATTCATTTGTTAGGACATACTTAGAGAAAGTCGAAACATTCAAACCAGAGAACATTGTAAACATTAATAGTGAATTCAGTTATGTCAGTGCATTCAAAACCGACTCAATAGCAGCTGCTTTCCTGGAACTCCCTTATGAAAAAGCATACATCAGCAAATACTGCAAAGGGTACTCTGGCTCTACACCTACCACCAAATTTGGAGGACTGGGATTTATGTTCCAGAAAGGCTCCCCCCTGGCCAAAGATGTTTCTAAAGCTATTTTGCAACTCTTAGAGGTGGGGGAACTGCAGAGGTTAGAAGAGAAATGGTTGAAGCCCTCAGGGGAGTGCTACAACAATTTGACCTCCGAGAGTACAGAAAGTTTGAAGCTTGGAAGCTTCTGGATTCTCTACGTGATTTCTGGTGCCACTTCTACTATTTGTTTTCTACTTTCTACCATCCATTCGCTAAAATCAAGCCTAAGATGCCCAAATGATAGGAGCCCGTGGAAAAGGGTGGTTAAGTTAACTAGAAAGATTTGTAGCAGAAAGCATAATAAAGAGACTACGGCACAGAAAGATGTTGTTACTTCCGGATGGGATTGTATCAGTATCACTGACAACCCTGAGCATCAGCAGGCAATGTCTCTTCAATTACCAGAAATCATAACTGTCTCTTCCCCACCAACACAGTTGTAA | 2727 | 0.403 | MHFPSTIPLWLSYLFISFVLTNGYQAEPTNGDNKVISIGAMIDVNSRIGKEQRVAMDIAAQRYNNTSKTHKLALHFQEPTKDPFRATSLAEEMIKTQKVQVIVGMNTWAEAASVAELVHQTRVPIISFVAPTITPPLMQIRWPYLVKMANNGTAYVKCIADMVHAYGWQKLVAIYEDDTYGGDFGMLALLSEALQDVGSMIEYRLALPSHSYLPNPGEFIQEELSKLTKNTPSRVFIVLQSSLDMVIHLFREASQMGLVDKESAWIIPESITNLLDSVNKSGTSYMQGALGIKTYFSENSSEYQHFEAQFRRTFRYKHPEEGDSNPGFYALQAYDSIRIVAQAVDRMASGNGSGRETLLREILASNFLGLSGKIQFESLQLLQNPILRIVNVNGKSYRELDFWTLESGFIPTEQGGNSTFRNTESLSGVVIWPGKTTRVPKGWNMPTKQNPMKIAVPGRTAFSKFVKVDYDEHEKRYKYSGFCIEIFEEVLGLLEYDLPYEYYPINGTYPDLVQLVYNKTYDAVVGDMTILAERLQYVDFTVPYTESGLSMVVTERSQESTWMFMKPFTWQMWAVTGAILIYTMLVVWYLERDSNPEFEGNWKVQISTALWFTFSSLFFAHREKMYSNLSRVVMVSWLFLVLILNSSYTASLSSMLTVQQLKPNVTDIEWLKKNNMKIGCDGDSFVRTYLEKVETFKPENIVNINSEFSYVSAFKTDSIAAAFLELPYEKAYISKYCKGYSGSTPTTKFGGLGFMFQKGSPLAKDVSKAILQLLEVGELQRLEEKWLKPSGECYNNLTSESTESLKLGSFWILYVISGATSTICFLLSTIHSLKSSLRCPNDRSPWKRVVKLTRKICSRKHNKETTAQKDVVTSGWDCISITDNPEHQQAMSLQLPEIITVSSPPTQL. | 909 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Seca11g04785 | 908 | FunFam | Glutamate receptor | 155 | 324 | - | - | |
| Seca11g04785 | 908 | CDD | GluR_Plant | 450 | 787 | - | - | |
| Seca11g04785 | 908 | Pfam | Bacterial extracellular solute-binding proteins, family 3 | 477 | 788 | IPR001638 | - | |
| Seca11g04785 | 908 | Gene3D | - | 344 | 455 | - | - | |
| Seca11g04785 | 908 | SMART | GluR_14 | 453 | 789 | IPR001320 | GO:0015276|GO:0016020 | |
| Seca11g04785 | 908 | Pfam | Receptor family ligand binding region | 54 | 394 | IPR001828 | - | |
| Seca11g04785 | 908 | SUPERFAMILY | Periplasmic binding protein-like I | 33 | 443 | IPR028082 | - | |
| Seca11g04785 | 908 | Gene3D | - | 733 | 794 | - | - | |
| Seca11g04785 | 908 | Gene3D | - | 460 | 560 | - | - | |
| Seca11g04785 | 908 | FunFam | Glutamate receptor | 561 | 691 | - | - |
Showing 1 to 10 of 20 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Seca11g04785 | - | - | gmx:100780320 | 1313.52 |
Showing 1 to 1 of 1 entries