Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Seca11g04782 | ATGTGTGGCACACTTTGCCAAGAGATGTATCCCCTTTCCACTACCAAGTTCAAAGTTTCAAATGTTTGGCACTTGCTTCCTGCACTCATATTGTTGTTTTCTTTCATTTCCTTTGGAGCTGAGGCCACCAGCAATGACAAAGTTGTATCCATTGGTGTAATCATTGACCTTAACTCTCGAGTTGGGAAAGAAGAGAAAGTAGCTATTGAACTTGCAGCTCAAAATTACAACAACAGTTTAAAGTACCACAAACTGTCTCTACATTTCAAGGACTCTGGAGGGGTGGCCCTAAGAGCAATTTCTATTGCTGAAGAGATGATTAAAATAAAGAAAGTGCAAGTGATAATTGGTATGCACTTATGGCAGGAAGCAATTTTGGTAGCTGAGGTTGGGAGTCAAGCTCAAGTTCCTGTTATTTCATTTGCTTCACCAATCACTACCCCCTCATTGTTTTCATTTCGTTGGCCTTTCTTAATGCTAATGGCTCATAATAGTACTGCATATGTAAAATGCATTTCTGATATAGTTCATGCATACAATTGGCAAAGAGTTACAGTGATTTATGAAGAGGATGCATATGGTAGTGATTATGGGATGTTAGCACTTCTATCTGAGGCACTCCAAACTGTTGGTTCACAGATTGAGCTCTCTTTGGCTCTCCCTCCTTATTCTTCTTTGTCTCATCCAAGTGGGGTAGTTCAAGTAGAGCTACTGAAGCTGCTTCACACTCAATCGCGTGTGTTCATAGTTCTACAATCATCACTACCTATGGCAGCTTGTTTGTTTGCAGAAGCTAGAAAGATGGAATTCTTGGATAAGGAAACAGCTTGGATAGTTCCAGAAAGAATAACTTATATGCTTGACTCTGTTAGTGACTCTGTCATTTCCTCCATGGAAGGTGTTTTGGGAATCAAGACTTATTATTTACAAAATAGTATTGATTATCAAAGTTTTCAAGTCCAATTCAGGAAAAGTTTTCAAAAAGAAAATCCAGAAGAAGAAAACCTCCAACCTGGATTTTATGCATTGCAAGCATATGATAGCATTAGAGTTGTTACACTTGCCATGGAGACATTAAGCAATCACAACAGTAGTCCTAAGATATTTCTAAAAGAAATGTTGACTTGCAATTTTCTTGGTTTAAGTGGAAAAATAAAATTTGAACATGGGCAAACCTTGCCCTCTCCTATATTTAGGATTGTAAATGTGATTGGAAAGATGTACAAAGAAATAGACTTTTGGACAGAAGAGTATGGATTTTCCAAAACCCTTTCCTTTGAATTAGCTGGTCAGCCAGTTAAAAATAATGACGTCACCAGTACAATAGAAGGTTTGACAGGTCCTGTAATTTGGCCTGGGAATCTACTGAGGACTCCAAAGGGTTGGAGAATGCCTACTAGAGCAAAACCAATGAAAATTGGTGTTCCAAGAAGGACTCCATTTGAGAAGTTTGTGAAGGTTGAGTATAATGAAAAATCAAATCAAACCAAGTACAGTGGATTCTGCATTGAAATTTTTGAAAAGATTCTAGATCTATTGCAGTATGATCTACCATATGAAATAGTTCCTTCTAATGGAACCTATAGTGATCTGGTTTATCTTGTCTATAACAAGACTCTTGATGCTGTTGTTGGTGACTTAACCATTGTGGCTGACAGAATGCAATATGTGGATTTTACACTGCCATATACAGAGTCAGGATTGTCAATGATAGTTCCAGCAAAATCTGAGGATACAGCTCTGATTTTTATGAAGCCCTTTACCTGGGAAATGTGGATGGTCATAGTTTCCATCCTCATCTACACCATGTTTGCAGTTTGGTACTTGGAGCGGGATTCCAATCCAGAATTCAGTGGTCCATGGAAGAATCAGATTAGCATTGCTCTATGGTTTACCATCTTTTCTCTATTCTTTGCCCACAGGGAGAAAATCTATAGCAACTTCACTCGAATGGTGATTGTTGTGTGGCTCTTCCTTGGTTTGATCCTAACCTCAAGCTACACTGCTAATTTATCCTCAATGCTCACTGTTCAACAATTGCAACCAAATGTTAAAAACATTGAGTCACTTAAATGGAGCAACTCCAAAGTCGGCTTCTCAGATGATCCATTTGTAAGAAAATATCTAGAAAACGTGCTTCATTTCAAATCACAGAATATTATTGAAGTTAGCGGGGACTACAATTACATTGAGGATTTCAAAAACAAGCGCATAGCAGCTGCTTTTATTGAAATCCCCTATGAAAAGGTATTCATCAGCAAGAACTGCCGGGGATACTCTGCCTTCACTCCTACCAACAGATTTGGAGGGCTAGGCTTTATGTTCCAGAAAGGTTCTCCAATTACCAGAGACTTTTCCAAAGCTATATTGCAGCTCTCAGAGAATGGAGACACGAAGTTACTAGAAGATAAATGGTTGAACAACCCAGATGAGTGTTCAACCAATATAACTACCAATGCCAACGGAAGCTTGAAGCTTCAAAGCTTCTGGGTTGTTTTTGCTGCATCTGTTTTCACTTCTACCTTTTGTGTGACAATATCCAAGGTACTGTCAATGAAAAGTAGTCAGCAGCATCAAGAGGCATTTGAAGGCAATCATGCTTGTTCAACTATTGTGACTGTTTGGAAGAAGGTGCTCACTCTACGGAAGTATATATACTATTCTAAAAACACTAATCAAAGGCAAGCTCCAAATGCAGCACATATAGAGGATGTAGAAGAATTTTGTTTGGAGCTTGAACAAGGAAGCACACCTGACACTGTAGCTGGAAATCAGGCTTTGCCACCACCAGAGAACTCTGCCTCGCCATAA | 2811 | 0.3892 | MCGTLCQEMYPLSTTKFKVSNVWHLLPALILLFSFISFGAEATSNDKVVSIGVIIDLNSRVGKEEKVAIELAAQNYNNSLKYHKLSLHFKDSGGVALRAISIAEEMIKIKKVQVIIGMHLWQEAILVAEVGSQAQVPVISFASPITTPSLFSFRWPFLMLMAHNSTAYVKCISDIVHAYNWQRVTVIYEEDAYGSDYGMLALLSEALQTVGSQIELSLALPPYSSLSHPSGVVQVELLKLLHTQSRVFIVLQSSLPMAACLFAEARKMEFLDKETAWIVPERITYMLDSVSDSVISSMEGVLGIKTYYLQNSIDYQSFQVQFRKSFQKENPEEENLQPGFYALQAYDSIRVVTLAMETLSNHNSSPKIFLKEMLTCNFLGLSGKIKFEHGQTLPSPIFRIVNVIGKMYKEIDFWTEEYGFSKTLSFELAGQPVKNNDVTSTIEGLTGPVIWPGNLLRTPKGWRMPTRAKPMKIGVPRRTPFEKFVKVEYNEKSNQTKYSGFCIEIFEKILDLLQYDLPYEIVPSNGTYSDLVYLVYNKTLDAVVGDLTIVADRMQYVDFTLPYTESGLSMIVPAKSEDTALIFMKPFTWEMWMVIVSILIYTMFAVWYLERDSNPEFSGPWKNQISIALWFTIFSLFFAHREKIYSNFTRMVIVVWLFLGLILTSSYTANLSSMLTVQQLQPNVKNIESLKWSNSKVGFSDDPFVRKYLENVLHFKSQNIIEVSGDYNYIEDFKNKRIAAAFIEIPYEKVFISKNCRGYSAFTPTNRFGGLGFMFQKGSPITRDFSKAILQLSENGDTKLLEDKWLNNPDECSTNITTNANGSLKLQSFWVVFAASVFTSTFCVTISKVLSMKSSQQHQEAFEGNHACSTIVTVWKKVLTLRKYIYYSKNTNQRQAPNAAHIEDVEEFCLELEQGSTPDTVAGNQALPPPENSASP. | 937 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Seca11g04782 | 936 | Gene3D | - | 722 | 814 | - | - | |
| Seca11g04782 | 936 | SUPERFAMILY | Periplasmic binding protein-like I | 44 | 462 | IPR028082 | - | |
| Seca11g04782 | 936 | FunFam | Glutamate receptor | 580 | 718 | - | - | |
| Seca11g04782 | 936 | CDD | PBP1_GABAb_receptor_plant | 50 | 424 | IPR044440 | - | |
| Seca11g04782 | 936 | Gene3D | - | 580 | 713 | - | - | |
| Seca11g04782 | 936 | MobiDBLite | consensus disorder prediction | 917 | 936 | - | - | |
| Seca11g04782 | 936 | FunFam | Glutamate receptor | 168 | 336 | - | - | |
| Seca11g04782 | 936 | FunFam | Glutamate receptor | 470 | 581 | - | - | |
| Seca11g04782 | 936 | PIRSF | IGluLR_plant | 20 | 918 | IPR017103 | - | |
| Seca11g04782 | 936 | SMART | GluR_14 | 472 | 808 | IPR001320 | GO:0015276|GO:0016020 |
Showing 1 to 10 of 19 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Seca11g04782 | - | - | cill:122296491 | 994.956 |
Showing 1 to 1 of 1 entries