Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g04749 ATGGTTGGTATGGAATTTGATAACATAGAGCCAGCTTGGCATTTTTGGCTCACATATGGTGCACATACAGGCTTTGGAGTTAGAATGCGATACACAAATAAGAGAAAGGAAGATGGCGCTATTAGTTCATGTAGGTTTGTTTGTTGCAAGGAGGGAGTGCGAACAAACAAGAAAGGAGCTTTGGTTAACAATCATAGAGCCCAGACTATAACTGACTGCAAAGCAAGGATTTCACTTCTATTAAAGAATGAAAAGCTTGTTGTTCATGAGTTTATAGAGGACCATAACCACCCTCTACAACTTCCAGAGACAACACACATGCTTGCATCGCACATAATGATAAGTGAAGTCCAAGCATATGAGATTGATCTAGCAGAAGACTCTGGATTAAAGCAGAAGGAAGCATTTCAACTTATGAGCACACATGCGGGGCATAAAGCTAATGTTGGATATACACAGTTGGATGTAAAAAACTACCTCAATGCAAGAAGACAAAGAAGCATGGTGTATGGCGAAGCTAGATGTCTTTTGCAATATTTTCAAAGACAATTGTTGGAGAACCCATCTTTCTTCCATGCATTCCAAATGTATATGGATGAACAGATAACAAATGTATTTTGGGTTGATGCAAATATGTTATTAGATTATGGATATTTTGGTGATGTTATATCATTGGACACTACATATTGTACCAACCGTGCAAATAGACCCCTTGCTTTATTTTCTGGTTTCAACCACTATAGGGGTGCGGTCATTTTTGGAGCAACATTGTTGTATGACGAAATGTGA 789 0.384 MVGMEFDNIEPAWHFWLTYGAHTGFGVRMRYTNKRKEDGAISSCRFVCCKEGVRTNKKGALVNNHRAQTITDCKARISLLLKNEKLVVHEFIEDHNHPLQLPETTHMLASHIMISEVQAYEIDLAEDSGLKQKEAFQLMSTHAGHKANVGYTQLDVKNYLNARRQRSMVYGEARCLLQYFQRQLLENPSFFHAFQMYMDEQITNVFWVDANMLLDYGYFGDVISLDTTYCTNRANRPLALFSGFNHYRGAVIFGATLLYDEM. 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g04749 262 PANTHER OS01G0519700 PROTEIN 1 261 - -
Seca11g04749 262 Pfam FAR1 DNA-binding domain 15 100 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g04749 Seca-Chr11 135586942 135587730 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca11g04749 FAR1 9e-18 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g04749 - - aprc:113870350 382.489