Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g04735 ATGGAGAACCAGAACATTGAAAAGGAGGAACCTGTGATCCTGTTGCAGAGTTGTGTGAAAAGGCTTCACTTTGGGAGCTGGGAAGAGAAAGAGGTGGCAGCAAAGGAGATTGAAATGTTAGCTAAAGAAGATATCAAGGCCAGAATGTTGATGACTGAACTCGGGGTGGTGCCTGTGTTGGTATCTATGGCAGCATCAGATGTGGCTAGCCGGCAGCTAGTTGGAGTGAAGGCGTTAAACCAGCTAGCTAATGGAACATACATTATTTGTTTTAACCAAACTTTGACTGAGCTGAAACATGATTTGCTTCTTTCAACGATACAGTGTCATGAAGTGATCTGTTTGTTCTTTTCTCAGGAACAAGCTTTGATATTGGAGGCAGGAATATTATCCCAGTTGCCTAAAAGAATTGACCTTGAAGATGAATCAACTATAAGTGAATTTGCAGACTTGTTTTCTTCATTGTCATCTCTAGCAAGTTCTGAATTCCCTCATGCTTCATTACACTTTCTCCCATTTCTTACTGACATTCTTAAATCATGCTCAAGATTTGATATCAAAATATCATGTTTGGGGGGCCTGTACAACGCCTCCACTGTGTTAGAGAATGCAGGGCCTTTGGTTTCTAATGGGGTTGTGCCTATCCTCTTAGAACTGTCCTTGATGAAAGAAATTTCAGAGAAAGCACTTTCCACTCTTGGCAACTTGGTAGTGACTAATATGGGAAAGAAAGCAATAGAGAATAGCTCAATCGTGCCAGAATGCTTGATTGAGATCTTATCATGGGAAGATAAACCCAAATGCCAAGAATTGTCAGTTTATATTTTAATGATTCTAGCTCATCAAAGCTCATCACAAAGAGATAAAATGGCACAGTCAGAGATTGTCCCTTTACTTCTTGAAGTGGCTCTATTAGGGAGCCCTTTAGCTCAGAAGAGAGCATTGAGATTGTTGCAATGGTTTAAGGATAATAGGCAAATAAAGATGGGGTCATATTCTGGCCCACAAACTCCCAGAACTGCAGTAGGTTCACCTGTAAATCAAAGAGAGACAAAAGAAGGGAAGAGAATGATGAAGAATTTGGTGAAAGAAAGTTTGTATAGGAATATGGAAAAAATAACTCAAAGGGCAAATGCAGGTGCGGATTCTTCTAAGCTGAAGTCCTTATTTGTCAGCACAAGTTCCAAGAGTTTGCCTTATTAG 1203 0.4015 MENQNIEKEEPVILLQSCVKRLHFGSWEEKEVAAKEIEMLAKEDIKARMLMTELGVVPVLVSMAASDVASRQLVGVKALNQLANGTYIICFNQTLTELKHDLLLSTIQCHEVICLFFSQEQALILEAGILSQLPKRIDLEDESTISEFADLFSSLSSLASSEFPHASLHFLPFLTDILKSCSRFDIKISCLGGLYNASTVLENAGPLVSNGVVPILLELSLMKEISEKALSTLGNLVVTNMGKKAIENSSIVPECLIEILSWEDKPKCQELSVYILMILAHQSSSQRDKMAQSEIVPLLLEVALLGSPLAQKRALRLLQWFKDNRQIKMGSYSGPQTPRTAVGSPVNQRETKEGKRMMKNLVKESLYRNMEKITQRANAGADSSKLKSLFVSTSSKSLPY. 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g04735 400 SUPERFAMILY ARM repeat 15 321 IPR016024 -
Seca11g04735 400 MobiDBLite consensus disorder prediction 330 347 - -
Seca11g04735 400 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 6 87 - -
Seca11g04735 400 MobiDBLite consensus disorder prediction 330 353 - -
Seca11g04735 400 Gene3D - 7 338 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g04735 Seca-Chr11 135302135 135303848 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g04735 8 345 U-box Gene Family AT1G27910 25.862 9.07e-12 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g04735 - - gmx:100813828 493.426