Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g04725 ATGTCTACAATCTTAAACTTACTCCTATTATTGTTGTTACTTGCTACTTCCTCCACCGCTCAACACCACCACCACCGCCGTGTCCTTCACCAACCACTATTCCCAAAAATCTCTCTTCCTCCAGTACAACCACCAGCTTCCTCTCCTGAAACCCAACCCAAACCACAAAAGCAACAACCCAAGCTTCCATTTTCTTCATCATCATCTTCTTCCTCATCTACTCCACCACAAAAGCCTTTCTTCCCTTCTTATCACTCTCCACCACTCCCTCCTTCACCAACCGTCTTTGCAACATTCCCAGCTAACATCTCTTCCTTACTCCTCCCTCGAACCTACTCCCATAACCACCACCACGCTGCCGCTGTCGCCGTTTCCCTCTCTCTCCTCTCACTAGCCCTTCTCGCCGCCGGCGCCGCCTTCTCCTACCACCGCCGGCGCCGCACTCACCTCACTTCCTCCTCCGGCGCCGATGACGACAAGGCTTCAAGATCGGACAGTCTCCGGCTATTCCCGCCGAACACCGCCACCTCCGACGGCGGCGAACGGAAGCCTCGCAGCAAGCCAAGCCCGAGGTCGGAGTTACTCTACCTCGGCACGGTGGCAGGGTCAGAGGAAGTCGCGGACTCGAGCTGCAGCGGCAATGGCGATTTCCGGCCACCGTACCGGAAACTTGGAGACTCGCCGGAGCTCAATCCGCTACCTCCACTGCCACGTCAAAACTTCAGGGCATGGACGAGTGTGGATTATGATGAAGGAAGAAAGGAAGAGGAAGGTGAAGAAGAAGAAGAAGAAGAGGAACAGTTTTTTTCTCCAAGAGGGTCTTCTGGGAACAGAAAACAGAGTCCTCCTTCACCTGCTGCACTTGCTGCATCAAGCTCTCGTTCCGCTTTTGATAAATTTGGAAGCAGAAGCTTCACTTCAAGAACCCCATCTTACCCTCGTTCTAATTCTCTTTCTAGTTCTGTTTCTCGTTCCCCTTCTCTGAATTTGAGCCCAGGAAGCATTCCCAACAACCCTGCATCCCCACCTTTCTCTTCCACCCCTTCTTCTCCGAAGCCAATGAGGGAGGACTTGAGTTCGAGTTGGGAGGGAAAGAATTCTTCTCAGACCACCACCAAACTGCCTCCTCCGCCACCGCCTCCACCGCCAAGGCGGTTTTGGGAGACTCCGGTTGTGGCTAGATTGGGTGAACCCTCGCAGCAAAATGTTGATGGGGTTGGTGTTAAGAATGAGAATGAAGAGACCCCAAAGCCAAAGTTGAAAGCTTTACATTGGGATAAAGTTAAGGCCAGCTCAGATAGGGCCATGGTTTGGGATCGGTTGAGACCAAGTTCTTTCCAGTTGAATGAGGACATGATTGAGACACTCTTTATGGTAAATAATTCCAATGGAAATTCTGGTTTGGCTTTTAGAGATAATGCTCGGCGTCAAGTAAATCATTTTTCTCCAATGCCACCGGAAAATAGGGTGCTTGACCCTAAGAAGTCTCAGAACATTGCCATTTTGCTTCGGGCACTGAATGTAACTATTGATGAAGTTTGTGAAGCCCTCAGGGAAGGCAATTGTGATACATTGGGAACAGAACTTCTAGAAAGTTTATTGAAGATGGCTCCAACCAAAGATGAAGAATTTAAGCTGAAGGAGTTTCAAGATGTAACGCCCTTCAAGCTTGGCCCAGCTGAGAAATTTCTTAAAGTCGTGCTCGATATACCTTTCGCATTCAAGAGAGTGGATGCTATGCTCTACATTGCTAATTTTGATTCAGAATTGGAATACCTGAAGAAGTCTTTTGAAACTCTGGAGGTGGCTTGTGAGGAATTAAGAAATAGCAGAATGTTTTTTAAGATACTTGAAGCAGTGCTCAGAACAGGAAATCGTATGAATGTTGGCACCAATCGCGGCGATGCACAAGCATTCAAACTGGACACACTTTTGAAGTTAGTTGATATTAAAGGAACTGATGGAAAGACTACTCTCTTGCATTTCGTTGTACAGGAAATTGTCAGAACTGAGGGTTCTCATATTTCCGGTGCTAATGATCACCAGGATTCTGACAACATCCAGCAATATACTCTTCAAGATGAAGTTGACTTTAGGAAGCTTGGACTGCAAGTTGTTTCTGGCTTGAGTGGAGAGCTCACCAATGTTAAAAAGGCAGCTGCTATGGATTCAGACATGCTGAGTAGTGATGTTAGTAAACTTGCAAGAGGAATTGAAAAGGTTGTGCAAGTTGTAAAATTGAATGAAGAATCACCTTTGAAAGAAACTAACCAAAAATTTTCTGAGGCAATGAAAGGTTTCTTGGAGAAGGGGGAGGAAGAGATTTTAAGAATACAGGCTCAAGAGAAAAATGCTTTCTCTTCAGTAAAGGAGATAACTGAGTATTTCCATGGAAATTCAGCAAAGGAAGAAGCTCATCCATTTAGAATTTTTATGATTGTGAGGGATTTCCTTTCAATACTAGATGGTGTATGCAAGGAAGTTGGGAAAGCAAATGAGAGGACTTTAGTTGGTTCCCGTCAATATGTAATGCCTGCAAATCCTACATTGCCAGCAATTTTCCCTGAGATTATTCCTAAGCAGCCATCTGATTCTTCAGAATCTGATTAA 2610 0.4613 MSTILNLLLLLLLLATSSTAQHHHHRRVLHQPLFPKISLPPVQPPASSPETQPKPQKQQPKLPFSSSSSSSSSTPPQKPFFPSYHSPPLPPSPTVFATFPANISSLLLPRTYSHNHHHAAAVAVSLSLLSLALLAAGAAFSYHRRRRTHLTSSSGADDDKASRSDSLRLFPPNTATSDGGERKPRSKPSPRSELLYLGTVAGSEEVADSSCSGNGDFRPPYRKLGDSPELNPLPPLPRQNFRAWTSVDYDEGRKEEEGEEEEEEEEQFFSPRGSSGNRKQSPPSPAALAASSSRSAFDKFGSRSFTSRTPSYPRSNSLSSSVSRSPSLNLSPGSIPNNPASPPFSSTPSSPKPMREDLSSSWEGKNSSQTTTKLPPPPPPPPPRRFWETPVVARLGEPSQQNVDGVGVKNENEETPKPKLKALHWDKVKASSDRAMVWDRLRPSSFQLNEDMIETLFMVNNSNGNSGLAFRDNARRQVNHFSPMPPENRVLDPKKSQNIAILLRALNVTIDEVCEALREGNCDTLGTELLESLLKMAPTKDEEFKLKEFQDVTPFKLGPAEKFLKVVLDIPFAFKRVDAMLYIANFDSELEYLKKSFETLEVACEELRNSRMFFKILEAVLRTGNRMNVGTNRGDAQAFKLDTLLKLVDIKGTDGKTTLLHFVVQEIVRTEGSHISGANDHQDSDNIQQYTLQDEVDFRKLGLQVVSGLSGELTNVKKAAAMDSDMLSSDVSKLARGIEKVVQVVKLNEESPLKETNQKFSEAMKGFLEKGEEEILRIQAQEKNAFSSVKEITEYFHGNSAKEEAHPFRIFMIVRDFLSILDGVCKEVGKANERTLVGSRQYVMPANPTLPAIFPEIIPKQPSDSSESD. 870
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g04725 869 MobiDBLite consensus disorder prediction 39 86 - -
Seca11g04725 869 SMART it6_source 410 836 IPR015425 -
Seca11g04725 869 PANTHER FORMIN-RELATED 9 860 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Seca11g04725 869 Gene3D Formin, FH2 domain 416 842 IPR042201 -
Seca11g04725 869 MobiDBLite consensus disorder prediction 253 267 - -
Seca11g04725 869 SUPERFAMILY Formin homology 2 domain (FH2 domain) 375 834 - -
Seca11g04725 869 MobiDBLite consensus disorder prediction 52 79 - -
Seca11g04725 869 MobiDBLite consensus disorder prediction 205 387 - -
Seca11g04725 869 MobiDBLite consensus disorder prediction 150 165 - -
Seca11g04725 869 Pfam Formin Homology 2 Domain 412 821 IPR015425 -
Seca11g04725 869 ProSiteProfiles Formin homology-2 (FH2) domain profile. 410 847 IPR015425 -
Seca11g04725 869 MobiDBLite consensus disorder prediction 350 371 - -
Seca11g04725 869 MobiDBLite consensus disorder prediction 270 335 - -
Seca11g04725 869 MobiDBLite consensus disorder prediction 145 192 - -
Seca11g04725 869 MobiDBLite consensus disorder prediction 372 387 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g04725 Seca-Chr11 135168705 135173683 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g04725 16 858 FH2 protein (formin) Gene Family AT2G43800 44.711 0.0 610
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g04725 - - gmx:100786203 1079.32