Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g04721 ATGCCATCAATTCAGCCCCAAGTCGCGCCTCACCGTGCCGCAAGCACCGCCACACGTCGATATGAACCACACCCTCACGTCTCACCCCTGCTCCATTGTTCCTCCTTATGGCCTGCATGCATTCGCATCGATTCGGAGAAATTGGAAGTGGATCGCATCGTTGATTGCTCTGGTATTGTTGAAGGCTGCTGGGTCGGTCTCTGTGAAGTTTTCTGTGTTGGGACTGACTCTGATTTTGCTCCAATGGAGATGAAGAGCCAAACATGCCTTAGAAGGCTGAAAAAGTTGTATGGAGAATGGACTGAATCACTCCAAGCATGTATAGCTCTTCTCAATCCCTCACCATTGTTGTACTTTTCTGTCCCTCCATTGCAGCCAAATTCTAGTTCGCTTGATACCTCCTCTGGCACCACTGCTTTAACTGCTCTTGTATTTGGAAGGACCATGATAATTGCCAATGCTGGGGATTGTCGAGCTGTACTGGGGAGGTGA 492 0.4919 MPSIQPQVAPHRAASTATRRYEPHPHVSPLLHCSSLWPACIRIDSEKLEVDRIVDCSGIVEGCWVGLCEVFCVGTDSDFAPMEMKSQTCLRRLKKLYGEWTESLQACIALLNPSPLLYFSVPPLQPNSSSLDTSSGTTALTALVFGRTMIIANAGDCRAVLGR. 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g04721 163 SUPERFAMILY PP2C-like 130 163 IPR036457 -
Seca11g04721 163 Gene3D - 102 163 IPR036457 -
Seca11g04721 163 MobiDBLite consensus disorder prediction 1 20 - -
Seca11g04721 163 Pfam Protein phosphatase 2C 129 163 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g04721 Seca-Chr11 135006531 135011424 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g04721 127 163 PP2C-type Phosphatase Gene Family AT2G33700 81.081 2.50e-13 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g04721 K14803 - gmx:100778015 69.3218