Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g04712 ATGACTGTTGCTGTTGCTTATTTTGACACTAGGAAATATCATGTAGTTGTGCTTGACTCCCCTGGCCATAAAGATTTTGTCCCAAACATGATTTCTGGGGCAACACAAGCTGATGCTGCAGTTCTTGTTATAGATGCCTCACTTGGTTCATTTTTGAAGCTGGTATGGATGGTAGCAAAGGACAAACGAGGGAGCATGCACAACTTTAAGATGGATGTTGTGGGGAGGCTTTTAATGGGAATTTCATAA 249 0.4177 MTVAVAYFDTRKYHVVVLDSPGHKDFVPNMISGATQADAAVLVIDASLGSFLKLVWMVAKDKRGSMHNFKMDVVGRLLMGIS. 83
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g04712 82 Gene3D - 1 73 IPR027417 -
Seca11g04712 82 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 51 IPR027417 -
Seca11g04712 82 Pfam Elongation factor Tu GTP binding domain 2 49 IPR000795 GO:0003924|GO:0005525
Seca11g04712 82 PANTHER TRANSLATION FACTOR 1 52 - -
Seca11g04712 82 PRINTS GTP-binding elongation factor signature 32 43 IPR000795 GO:0003924|GO:0005525
Seca11g04712 82 PRINTS GTP-binding elongation factor signature 16 26 IPR000795 GO:0003924|GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g04712 Seca-Chr11 134965041 134965289 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g04712 1 51 Eukaryotic Initiation Factors Gene Family AT5G10630 80.392 6.67e-25 94.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g04712 K14416 - gmx:100801724 100.908