Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g04686 ATGGCATCAGATAGCCACTCACCACCTCTGGAGATATTAGTTCGAGGGCCAGAAGAGTTCTCACTCTGGACTGGACCCCCGTTTGCCAATGGTCAACCTGGTGTCAAGCTTGAAAAAGTTAATTGCATGAATGCAAAATTCAGTGATGATGGATCTAGACTTATGGTGATGAAATCCAACTCTGTGATTAGTGTATATGATTGCAAAAGTGCTAAAGAGATTAGGTCTTTTGAAGTGCCCAATGTTGTAGCTGCTATCCTGTCACCCCGTGGAACGTATTTGCAAACCTTCAAAAAACCTGCGCCGCAAGAAAAGAATGTGACTCTGTGGAAAACAGAGACCGGTGATCCTGTTTACCAACACTCCCAAAAGAACCTGACAAAAACCAATTGGCCTGCAATTCAGTTCAGTTCTGATGAAGCTACTGCATGCCGAATGGCAACTAATGAGGTGCAATTTTTTGACACCGGGGATTTCTCTAAAGGAGTTATCCATCGGTTAAAAGTTCCAGGAGTTGCTGCCATTGAGCTTTCTAGCACGCCTGGGTCTCATGTAGCTGCATTTGTTCCAGAATCCAAGGGGGTTCCTGCTAGTGTACAAATATATGCTTGTGGAAATGCTTCCCAAAGTCAACCAGTTGCTCGACGGAGTTTTTTCCGATGTTCCACAACCCAACTTAAATGGAATAATGGTTCAACTGGGCTTCTAGTGGTGGTGCAGTCAGACGTTGACAAAACCAATCAGAGTTACTATGGAGAATCAAAGTTATGCTACCTGACAACAGATGGGATGCATGAAGGACTTGTGCCTCTTCGGAAAGATGGACCTATTCATGATGCTCACTGGTCATATTCTGGCTTGGAATTTGCTGTTGTATATGGGTTTATGCCTGCTAAAGCAACTGTGTTTGACAAGAAGTGCAATCCTCTACTGGAACTTGGAACTGGTCCTTACAACACTCTTCGATGGAACCCAAAAGGGAAATTTTTATGTTTGGCTGGATTTGGTAACTTGCCTGGTGATATGGCATTCTGGGATTACGCAGAGAAGAAACAGCTTGGAACAACTAAGGCTGAATGGTCTGTGACAAGTGAATGGTCTCCAGATGGGTGCTATTTCATGACAGCGACAACAGCTCCAAGGCTTCAAGTTGACAATGGGTAA 1164 0.4416 MASDSHSPPLEILVRGPEEFSLWTGPPFANGQPGVKLEKVNCMNAKFSDDGSRLMVMKSNSVISVYDCKSAKEIRSFEVPNVVAAILSPRGTYLQTFKKPAPQEKNVTLWKTETGDPVYQHSQKNLTKTNWPAIQFSSDEATACRMATNEVQFFDTGDFSKGVIHRLKVPGVAAIELSSTPGSHVAAFVPESKGVPASVQIYACGNASQSQPVARRSFFRCSTTQLKWNNGSTGLLVVVQSDVDKTNQSYYGESKLCYLTTDGMHEGLVPLRKDGPIHDAHWSYSGLEFAVVYGFMPAKATVFDKKCNPLLELGTGPYNTLRWNPKGKFLCLAGFGNLPGDMAFWDYAEKKQLGTTKAEWSVTSEWSPDGCYFMTATTAPRLQVDNG. 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g04686 387 Gene3D - 28 193 IPR015943 GO:0005515
Seca11g04686 387 FunFam Eukaryotic translation initiation factor 2A 30 184 - -
Seca11g04686 387 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2A 10 387 IPR011387 GO:0003743|GO:0006413
Seca11g04686 387 Pfam Eukaryotic translation initiation factor eIF2A 216 387 IPR013979 -
Seca11g04686 387 SUPERFAMILY DPP6 N-terminal domain-like 42 380 - -
Seca11g04686 387 Gene3D - 195 379 IPR015943 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g04686 Seca-Chr11 133938301 133945395 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g04686 130 387 Eukaryotic Initiation Factors Gene Family AT5G27640 25.735 1.96e-15 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g04686 K15026 - gmx:100811589 728.783