Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g04683 ATGACATTTAGCTCGGAAGATGAAGTTGCTAGGTATTACATGAATTATGCTCGATGCAAGGGGTTTGGAATTAGTAAAATAAGTTCAAAAAATGGAGATGGTGGAAAAAGAAAGTATTTGAGCAATTCAAAGAACGCATTGAAGTCAAACCCCATTACAAGAACACAATGTATGGCTAGATTGAATGTATGTATGAGTTCATATGGAACAATTAAGGTTTCAAGTGTTGTTCTTGAGCATAATCATGAGCTAAGTCCAAGCAAAGCTCGATACTTTAGATGCAACAAGAATTTGGGCCCTCACATAAAAAGGAGGTTAGAACTTAATGATCAAGTTGGGATCAATGTAAGCAGAAATATTAGATCTTTAGTTGTTGAAGAAAATGGGTACGAGAATTTTACATTTGGAGAAAAAGGTTGTAGAAACTATATAGACAGATGGGAAAAAATGATTGAAGATTATGAACTACATGATAATGAATGGTTGAAAGGGATATTTGCTGAACGACATTGTTGGGTTCTTATATATGTGATAGACACATTTTGGGCTGGAATGTCAACAACACAACGGAGTGAAACTTGTGATGCCTTTTATGAAGTTGATTCAATGGGGATAACATCTGATGATGATTTGTTGAAAGTAATGAATTGGACTGAGAGCTTAAAGAATGAGTTAACTTGTAAAGATACATCGTCTGGGATGATTAAAGAGCCATTTATGGAGCAAGACAGTTTAGTTCAAAGCCAAGTGACTAAAATTCTTGACTCTATAGTTACTCGAAGTAAAGGGCGTCCCCCTTAA 801 0.3521 MTFSSEDEVARYYMNYARCKGFGISKISSKNGDGGKRKYLSNSKNALKSNPITRTQCMARLNVCMSSYGTIKVSSVVLEHNHELSPSKARYFRCNKNLGPHIKRRLELNDQVGINVSRNIRSLVVEENGYENFTFGEKGCRNYIDRWEKMIEDYELHDNEWLKGIFAERHCWVLIYVIDTFWAGMSTTQRSETCDAFYEVDSMGITSDDDLLKVMNWTESLKNELTCKDTSSGMIKEPFMEQDSLVQSQVTKILDSIVTRSKGRPP. 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g04683 266 Pfam FAR1 DNA-binding domain 11 85 IPR004330 -
Seca11g04683 266 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 144 246 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g04683 Seca-Chr11 133878067 133880027 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca11g04683 FAR1 7.8e-08 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g04683 - - tpra:123899783 236.884