Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g04678 ATGCAAAAGCAGAACTCATTCCCACTGCTCAACACAGTTCATGTCAAACTTCTCGCCTTCGATCTCCTCTCCCTCACTCCTTCTTCTTCTTCAGACCCTGTATTCTACCGCAGAGGCATTCCTCTCTCACGCGCAGAAACCCTAGGCACCGTAACCCTAAGGGACCTCAAACCCAACAGGTTCCTCAGGTTCGCCATCGACGACGGCACCGGCTGCATCCCTTGCATCCTCTGGCTCAACCACCTCTCCTCCCCTCACCTCGCACGCCGCCGGAGCCCACAAGACCTCCGCCTCATCGCCGACTCCGCCGCACGCTCCGCTGCGCTGGTGAAGGTGGGAGTGGTGGCCAGAGTGAGGGGCCGAATCACAGCGTATAAGGGTTCCGTGCAGATAACAGTGTCAGATGTTATGCTGGAGAGGGATCCCAATGCAGAGATCCTGCACTGGCTCGAGTCTATCAACTTGGCTCGTAACTGTTACAATCTTTTGCCTCAACAACCCTCTTCTGCCTCTGTTGCTCCCCCTCCACCCAACTAG 537 0.5661 MQKQNSFPLLNTVHVKLLAFDLLSLTPSSSSDPVFYRRGIPLSRAETLGTVTLRDLKPNRFLRFAIDDGTGCIPCILWLNHLSSPHLARRRSPQDLRLIADSAARSAALVKVGVVARVRGRITAYKGSVQITVSDVMLERDPNAEILHWLESINLARNCYNLLPQQPSSASVAPPPPN. 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g04678 178 SUPERFAMILY Nucleic acid-binding proteins 28 154 IPR012340 -
Seca11g04678 178 Gene3D - 8 163 IPR012340 -
Seca11g04678 178 PANTHER REPLICATION PROTEIN A-RELATED 9 171 IPR040260 -
Seca11g04678 178 Pfam OB-fold nucleic acid binding domain 51 137 IPR004365 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g04678 Seca-Chr11 133648002 133648538 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g04678 39 155 Core DNA Replication Machinery Family AT2G24490 26.496 1.19e-07 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g04678 K23312 - csin:114287844 209.149