Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g04648 ATGGCGACCAATTTTGCTCAGGGCCTCACCTTATTAGTTATAACGGCTTCAATTTTTGCAGTGACTATGGCCAATCCCAACAAGGACTGGTCCTTTGGTTTTAACTACACCGATTGGTGGTCCAGATTCGGGAACCATCACCTAAATAAGACACAGCAAGAACCCAAGAAGATCGTTGTGGGTGGGTCTGAGCATTGGCACTTCGGTTATAACTACACTGATTGGGCTATCAAGAATGGCCCTTTTTACCTCAACGATACTCTAGTTTTCAAGTATGATGCTCCAAATGCCACAAGTTTTCCACACAGCGTGTACTTGTTTCCAAACTGGTGGAGCTTCATGAATTGTGATGTTAAGAGGGCTAAGATGCTGGCGAATCCTACACAAGGTGGAGGAGAGGGTTTTCAGTTGGTGATAAACAAGTGGAAGCCTTACTACTTTGGTTGCGGAGAGAGAAATGGATTTCATTGCAATAATGGACAGATGAAGTTCGCTGTTATGCCAATGCCTCGTCCCTTCTGGCCATTGCCATGA 534 0.4494 MATNFAQGLTLLVITASIFAVTMANPNKDWSFGFNYTDWWSRFGNHHLNKTQQEPKKIVVGGSEHWHFGYNYTDWAIKNGPFYLNDTLVFKYDAPNATSFPHSVYLFPNWWSFMNCDVKRAKMLANPTQGGGEGFQLVINKWKPYYFGCGERNGFHCNNGQMKFAVMPMPRPFWPLP. 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g04648 177 PANTHER GLYCINE-RICH PROTEIN-LIKE 4 172 - -
Seca11g04648 177 Gene3D - 54 169 IPR008972 -
Seca11g04648 177 ProSiteProfiles Phytocyanin domain profile. 56 170 IPR003245 GO:0009055
Seca11g04648 177 SUPERFAMILY Cupredoxins 56 169 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g04648 Seca-Chr11 132584348 132586364 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g04648 59 175 Phytocyanin Superfamily AT2G27035 32.479 2.67e-06 43.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g04648 - - gmx:100803580 313.153