LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Seca11g04629	ATGGATTCAAGCTCTAGAGAAATAGCCCATGATTTCTCACCCCTTGTCAAAATCTACAAAGACGGTCGCATAGAGAGACTCCTAGGGTGCGATTTTGTTCCCCCGTCGCTTGATCCCACAACCAACGTCGAATCCAAAGACGTTGTGATCTCAAAAGATGAAGACATATCAGCCAGGATCTTCATTCCTAAACTCAATGGTGATCAAAACCAAAAGCTCCCCGTCTTTGTTTACTTCCACGGTGGTGGCTTCTGCATAGAAACACCTTCTTCACCTCATTACCACAAATACCTCAACTCAATTGTTTCTCAGGCGCATGTAATTGCTGTCTCTGTTCATTACAGAAGAGCCCCAGAACACCCTCTTCCTATTGCTTATGAAGATTCATGGACTTCCCTCAAATGGGTCGCTTCCCATTTCGGTGGAAACGGTCCTGATGAGTGGCTCAATCGCCACGCAGATTTTAAAAAGGTGTTCTTTGCAGGGGACAGTGCAGGGGCTAACATTGCACACCACATGGCTCTTCGGGTTGGAACAGAAGGGCTTTCGGGTGTGAAGCTAGAAGGGATTGTTTTAGTTCATTCCTACTTTTGGGGCATTGAAAGAATTGGATCAGAGACCAAGCGATCTGAACATTTAGCCATGGTGGAGAACTTGTGGCGTTTTACATGCCCAACCACAACTGGATCCGATGACCCGTTGATCAACCCGGCTAAGGATCCGAATTTAGGGAAGCTTGGTTGTAACAGAGTTTTAGTTTTTGTTGCTGAGAATGATTTGTTTAAGGACAGGGGTTTGTATTATAAGGAAGTTCTGGAGAAGAGTGGGTGGCATGGTGTTGTGGAGGTGATGGAGGCAAAAGGTGAAGGACATGTGTTTCATCTGTTCAATCCAAATTGTAAGAATGCTCTTTCCTTGCTCAATCGAATTGCTTCCTTCATCAATCACGGTTAA	954	0.4507	MDSSSREIAHDFSPLVKIYKDGRIERLLGCDFVPPSLDPTTNVESKDVVISKDEDISARIFIPKLNGDQNQKLPVFVYFHGGGFCIETPSSPHYHKYLNSIVSQAHVIAVSVHYRRAPEHPLPIAYEDSWTSLKWVASHFGGNGPDEWLNRHADFKKVFFAGDSAGANIAHHMALRVGTEGLSGVKLEGIVLVHSYFWGIERIGSETKRSEHLAMVENLWRFTCPTTTGSDDPLINPAKDPNLGKLGCNRVLVFVAENDLFKDRGLYYKEVLEKSGWHGVVEVMEAKGEGHVFHLFNPNCKNALSLLNRIASFINHG.	318

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Seca11g04629	317	PANTHER	ARYLACETAMIDE DEACETYLASE	12	300	-	-
	Seca11g04629	317	SUPERFAMILY	alpha/beta-Hydrolases	6	315	IPR029058	-
	Seca11g04629	317	Gene3D	alpha/beta hydrolase	19	316	IPR029058	-
	Seca11g04629	317	Pfam	alpha/beta hydrolase fold	76	294	IPR013094	GO:0016787
	Seca11g04629	317	ProSitePatterns	Lipolytic enzymes "G-D-X-G" family, putative serine active site.	158	170	IPR033140	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Seca11g04629	Seca-Chr11	132145356	132146309	Dispersed/Proximal

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Seca11g04629	1	314	Carbohydrate Esterase	AT3G48700	50.610	1.57e-106	312

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Seca11g04629	-		-	gmx:100801816	525.013

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