Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g04576 ATGGAACTCATTATTTCTATTTTAGTTTGCATCTTCCTCTTTCTCTCAACTCTCTTTTCCTATCCATTAATAAAGAAACACAAGAAACCCCAACAAAGCATAACTAAGCCTAAGCTTCCCCCTGGATCAATGGGTTGGCCTTATATAGGAGAGACTCTTCAACTCTATTCTCAGGACCCTAATATCTTCTTTGCTTCAAAGCAGAAAAGATATGGAGAAATTTTTAAAACACACATACTAGGATGTCCATGTGTGATGCTCACTAGTCCTGAGGCTGCAAGGTTTGTGTTGGTGACTCATGCTCACTTGTTCAAACCCACATACCCAAAAAGCAAAGAGAAACTCATAGGCCCTGCTGCATTGTTCTTTCACCAAGGAGATTACCACACTCGCATTAGAAAGCTTGTTCAAAACTCCCTTTCTCCTGAATCAATCCGGAAACTCATCCCTGACATCGAAACCGAGGTCATTTCTGCTTTGGAATCATGGGTTTCTAATGGACAAGTCATTAACGCTTTCCAAGAAATGAAAAAGTTCTCTTTCAATATTGGCATCCTCTCTGTCTTTGGTCACTTGGAAGGGAAATATAGAGAGAAGCTTAAGGAAAATTATTGCATAGTAGAGAAAGGCTACAATTCTTTCCCAACTAGGATACCTGGAACTGCATACTCTAAAGCACTTTTGGCAAGGAAGAGAATCAGAGAGATTATAAGTGAGATAATTTGTAAGAGAAAAGAGCAGAGATTGATTGAGAAGGATCTATTAGGCCACTTGCTGAACTACAAGGATGAAAAGGGAGAAACACTAACGGATGACCAAATTGCTGATAATGTAATTGGGGTACTATTTGCTGCACAGGATACTACAGCAAGTGTTCTAACATGGATTCTCAAGTATCTTCATGATGACCAGAAACTTCTTGAAGCAATAAAAGCAGAGCAAATGGCAGTATATGAAGCAAATGAAGAAGGGAAGATGCCATTGACATGGGGTCAGACTAGAAATATGCCAATTACTTATAGGGTAATATTGGAAAGTCTTAGGATGGCAAGCATCATATCATTTACTTTTAGGGAAGCTGTTGTTGATGTAGAATACAAAGGATATCTTATACCAAAGGGTTGGAAAGTAATGCCACTGTTCAGGAATATCCATCATAATCCAGAATTCTACCCTGCTCCTCACAATTTTGACCCATCAAGATTTGAGGTACACTATGCTTAA 1224 0.3889 MELIISILVCIFLFLSTLFSYPLIKKHKKPQQSITKPKLPPGSMGWPYIGETLQLYSQDPNIFFASKQKRYGEIFKTHILGCPCVMLTSPEAARFVLVTHAHLFKPTYPKSKEKLIGPAALFFHQGDYHTRIRKLVQNSLSPESIRKLIPDIETEVISALESWVSNGQVINAFQEMKKFSFNIGILSVFGHLEGKYREKLKENYCIVEKGYNSFPTRIPGTAYSKALLARKRIREIISEIICKRKEQRLIEKDLLGHLLNYKDEKGETLTDDQIADNVIGVLFAAQDTTASVLTWILKYLHDDQKLLEAIKAEQMAVYEANEEGKMPLTWGQTRNMPITYRVILESLRMASIISFTFREAVVDVEYKGYLIPKGWKVMPLFRNIHHNPEFYPAPHNFDPSRFEVHYA. 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g04576 407 PRINTS E-class P450 group IV signature 385 403 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g04576 407 PRINTS E-class P450 group IV signature 275 301 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g04576 407 PRINTS E-class P450 group IV signature 62 85 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g04576 407 PRINTS E-class P450 group IV signature 336 352 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g04576 407 Gene3D Cytochrome P450 28 405 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g04576 407 SUPERFAMILY Cytochrome P450 34 403 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g04576 407 PANTHER CYTOCHROME P450 26 37 402 - -
Seca11g04576 407 FunFam Abscisic acid 8 29 407 - -
Seca11g04576 407 Pfam Cytochrome P450 40 403 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g04576 Seca-Chr11 130564049 130567849 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g04576 5 405 Cytochrome P450 AT3G19270 71.322 0.0 605
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g04576 K09843 - gmx:100806350 724.161