Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g04552 ATGGCGGGGCGTTCAACATGTATTTCCTTAGGTGTTGGAGAATGGGAAATGTGTGGTTTCCTTGGTGCTCAATATTTGTTCCCTATTCTTCAATGGGGTCCTAGTTACAGCTTCAAACTCTTTAAATCTGACCTTGTTGCTGGCCTCACTATTGCTAGCTTGGCCATCCCACAGGGAATCAGTTATGCTAAGCTTGCAAATCTTCCTCCAATTGTGGGACTCTGTGTGGAATCATTTGACATTGATTTGAAGGAACAGAAGGTGACTGTGAAAGGAAATGTAAAGCCAGATGAAGTTCTGAAAACTGTTTCCAAATCTGGAAAGAAGACTGCCTTCTGGGTGGATGAAGCACCACTAGCTGAGACTGAAAACAAGCCTTCAGAAACTGCAACTGTTGTCTCAGATGAGCCTGATAACAAGCCTTCAGAAACTGCCACTGTTGCCTCAGTTGAATTGAATGGCACATCTCGGAGGCGCCGCAGAAACAGGTCAACAAAACAATGGTTTTTCACTGGGATTGCTCTGCTTGGTTAA 534 0.4438 MAGRSTCISLGVGEWEMCGFLGAQYLFPILQWGPSYSFKLFKSDLVAGLTIASLAIPQGISYAKLANLPPIVGLCVESFDIDLKEQKVTVKGNVKPDEVLKTVSKSGKKTAFWVDEAPLAETENKPSETATVVSDEPDNKPSETATVASVELNGTSRRRRRNRSTKQWFFTGIALLG. 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g04552 177 CDD HMA 76 109 IPR006121 GO:0046872
Seca11g04552 177 Gene3D - 61 111 - -
Seca11g04552 177 PANTHER SULFATE TRANSPORTER 23 76 IPR001902 GO:0016020|GO:0055085
Seca11g04552 177 MobiDBLite consensus disorder prediction 124 153 - -
Seca11g04552 177 MobiDBLite consensus disorder prediction 123 163 - -
Seca11g04552 177 Pfam Sulfate permease family 41 74 IPR011547 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g04552 Seca-Chr11 129601330 129604877 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g04552 15 74 Inorganic Solute Cotransporters AT3G15990 70.000 1.11e-21 89.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g04552 K17471 - gmx:547569 113.62