Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g04551 ATGTGCCTTGGCCTCAAAGTGTTTCCATCTGTTGGACAGTCTGTCTGGTTAAGGCTGATCAATGACAAATTATGGTATATCTATTGTAAGAGCACTGTTCTCATGTCAGAGTTTGTCATTAGTCATATTGGGCATCATAAAACATTGAAGATCTTGAAATTTGAATTGGAGAAGATCAGAACTGGTTTCTCTACACCTAATGCAGCGGAACAAGAAACTGATGAAGTTTATGCTCGTATCACCTTGGTTCCAGAATCAAATCAAAATGAGCCGACAATTCCCGACCCTAGTCTACCCGAGACCCAGAAACAGAAGTTTCACCATTTTAGCAAGATATTAACTGCCTCTGATACTAGCACACATGGAGGATTTTCAGTTCTGCGGAGGCATGCTACCGAGTGCTTACCTGAATTGGTATTCTGCTCTCTTGGTTTCCTCAAGCTGAGGCTGAATCTGTATCTGTATATTTAA 471 0.4098 MCLGLKVFPSVGQSVWLRLINDKLWYIYCKSTVLMSEFVISHIGHHKTLKILKFELEKIRTGFSTPNAAEQETDEVYARITLVPESNQNEPTIPDPSLPETQKQKFHHFSKILTASDTSTHGGFSVLRRHATECLPELVFCSLGFLKLRLNLYLYI. 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g04551 156 Gene3D - 106 146 IPR015300 -
Seca11g04551 156 SUPERFAMILY DNA-binding pseudobarrel domain 96 139 IPR015300 -
Seca11g04551 156 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 68 140 IPR044835 GO:0003677|GO:0006355|GO:0009725
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g04551 Seca-Chr11 129598939 129600836 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g04551 69 138 B3 DNA Binding Superfamily AT4G23980 70.423 2.37e-27 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g04551 K14486 - gmx:100820503 130.183