Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g04544 ATGTTGGGGCAGATTGATTGTATCTTAAAAGTTCAGAACATGCCAAAAACCCTTTCTTGCTTTGAGGAATACAGAGAAATGGTAAAGATTAAGGCTGACAAACTACAGAAGAAGCACCCGCGTTGCTTGGTTGATGGAAATGAGCTTTTACGGTTCCATGGCACAAGTATTGCATGCTCTCTTGGTATAAATAGTTCCTATAGCCTATGCACTTTAGACTACTGTGGTGTGTGTCAAATTCTGAGGCATGGCTTCTCCACCAACAAGGAATTTCAAGGTACATTAGGTGTTTACACCACTTCTACAAGTGGAAAAGCCTTTGATTCCATTAGGCCATCTGATTCTGATGAGAGAACATTTGCTAGAAAGTCAGCTATAGTGTGTAGAGTAATAGCTGGGAGAGTTTATTGTCCTCTTGAAGAGAATCAAGAAAAGGTTGATTCAGGGTTTGACTCATTGGCAGATAAAACAAGTAATCATTCAGATGTTGAGGAACACTTTTAA 504 0.3948 MLGQIDCILKVQNMPKTLSCFEEYREMVKIKADKLQKKHPRCLVDGNELLRFHGTSIACSLGINSSYSLCTLDYCGVCQILRHGFSTNKEFQGTLGVYTTSTSGKAFDSIRPSDSDERTFARKSAIVCRVIAGRVYCPLEENQEKVDSGFDSLADKTSNHSDVEEHF. 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g04544 167 Gene3D - 3 166 - -
Seca11g04544 167 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 4 160 - -
Seca11g04544 167 SUPERFAMILY ADP-ribosylation 24 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g04544 Seca-Chr11 129467212 129467715 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g04544 3 167 C2H2 Transcription Factor Family AT5G54630 59.302 1.98e-61 195
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g04544 - - mtr:11419803 254.988