Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g04464 ATGCCTCTACATGTTAGATGCCTCAAACTGTGGTTTGTTCTCACAATGGACAGGTTTTCGACGTCGAGTTCTGCACCGTCCAACCCACTAGCCTCCATCGAAGCTACCACTGGAACGCATGTGTTTCCTTCAACTACCCATTTCCCCCTTCCTGTTACCCAATTCTATTATCAACCATCTTCTTTTGAACCATATGATTCGAACCTTCCATATATGCAGGCATTTCGCCCTAATGGGCACCCTTTATATTCTTTTGCAATAGGGCAAAGCAGTGTTCCTTTCGGAATGCTAAAGTCTCTACCTCAAGCTTTGCCATCCCAACCGGCAAGAGAAGAGGAAAATAAGACGAGGGACGCATGGATGTGCAAAATTGCTAGGCGCAAAAGGAAACAAATCTTACAAGCAAAACGAAGAAGTAGAAGTTTGACTTCTGAGGCCCCTTACATACTAGAATCAAATCAATGGTACATAAGGGCGGAACCTTTTACTAGTGGAGACACAAACACCCAAAACATAAGCTCCTTTGATGTTTGCACCCCAGATGGAAAGAAGCTCAAAGAAATTTTAACAAAGAAGTTAAGAAAAAGCGATGTTGGCACCCTAGGTCGCATTATTCTTCCAAAGAGGGACGCTGAAGAAAAGCTTCCACCCTTGTGGAGCAAAGATGCAATCGATATTGTCTTTCAAGATGTATATTCTGACCAGAGATGGAACATGAAATACAGGTATTGGTCTAATAACAATAGTCGAATGTATGTTGTTGAAAATGCAGGTAAACACCCTTTATTGTTGTTGCCAAATACTATCATTGAAGTTTTCATGGTTTTGGCCTCATAA 837 0.417 MPLHVRCLKLWFVLTMDRFSTSSSAPSNPLASIEATTGTHVFPSTTHFPLPVTQFYYQPSSFEPYDSNLPYMQAFRPNGHPLYSFAIGQSSVPFGMLKSLPQALPSQPAREEENKTRDAWMCKIARRKRKQILQAKRRSRSLTSEAPYILESNQWYIRAEPFTSGDTNTQNISSFDVCTPDGKKLKEILTKKLRKSDVGTLGRIILPKRDAEEKLPPLWSKDAIDIVFQDVYSDQRWNMKYRYWSNNNSRMYVVENAGKHPLLLLPNTIIEVFMVLAS. 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g04464 278 CDD B3_DNA 188 251 IPR003340 GO:0003677
Seca11g04464 278 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 129 254 IPR044800 GO:0003700
Seca11g04464 278 Gene3D - 178 260 IPR015300 -
Seca11g04464 278 SUPERFAMILY DNA-binding pseudobarrel domain 188 254 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g04464 Seca-Chr11 126952857 126955594 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g04464 174 259 B3 DNA Binding Superfamily AT1G28300 54.651 8.66e-26 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g04464 K09287 - jre:109014422 154.066