Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g04460 ATGGCTGCGTTGATGAAAAAATCAAATGGGGTCTACTTTCCCGAGGAGAAACTCTGCAAATGGTTCACTCAAATACTGTTGGCAGTAGAATACCTACATTCAAATTTTGTTTTACACCGTGACCTAAAGTGTTCTAACATCTTTCTCACCAAGGATCAGGATGTTCGCCTAGGGGATTTTGGGCTTGCTAAGACACTAAAAGCAGATGATTTGGCTTGTTAA 222 0.4054 MAALMKKSNGVYFPEEKLCKWFTQILLAVEYLHSNFVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLAC. 74
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g04460 73 ProSitePatterns Serine/Threonine protein kinases active-site signature. 37 49 IPR008271 GO:0004672|GO:0006468
Seca11g04460 73 ProSiteProfiles Protein kinase domain profile. 1 73 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca11g04460 73 SUPERFAMILY Protein kinase-like (PK-like) 7 69 IPR011009 -
Seca11g04460 73 Gene3D Transferase(Phosphotransferase) domain 1 1 72 - -
Seca11g04460 73 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 1 72 - -
Seca11g04460 73 Pfam Protein kinase domain 9 68 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g04460 Seca-Chr11 126706004 126706690 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g04460 19 71 MAP Kinase Gene Family AT4G01370 50.000 3.73e-12 57.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NEK Seca11g04460 Pkinase 2.3e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g04460 K08857 - gmx:100780141 147.132