Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g04458 ATGCTTCTGAGTTCATTTGGTGTCACATGGCCATCGTGGTGGTGGGACTCCACCAACTCGAAGCTCACTGCAACCCTTCTGGTCACCCTGATCGTTGTGCTATGGCTGTTGTGGAGATTCAAGAGTTCAATAAACACATCCACCCTTCCATCTCCATTGCCTCCTGGTCCTGTTGGCTTCCCATTGGTTGGGTACCTTCCCTTTCTAATTCTAGGAACCCACCTCCACCTCAAATTTGATAAGCTTGCACGAGTTTATGGTCCTATCTTCAAGCTCATGTTGGGAACCAAAACATTCGTAGTGGTTAGCTCACCATCTCTGGTGAAAGAGATAGTGCGTGACCAAGACACCATTTTTGCCAACCGTGACCCTCCCATTGCCCTATTGCTTAGCTTGTACGGTGGTGATGACATAGCCTCTTTGCCTTACGGTCCACAGTGGAAGAAGGCTCGCAAAATATTGGTTCGTGAATTGCTCAGCAATACTAACCTCAGTAACTCATTTTCTCATCGAAGGGTGGAGATTCAGAAATCCATCAAACATGTGTATGAGGAGAAAATAGGGTGCCCTGTAAATGTTGGTGAGTTGGCTTTTCTAACAGCTACAAATTCAATTATGAGTATGATTTGGGGTGAGACTTTACAAGGAGAAGAAGGGGCTGCTATTGGGGTTGAGTTTAGAGCATTGGTGTCAGAACTCATGGTGTTAATTGGGAAACCAAATATTTCAGATGTTTACCCTGCACTAGCCTGGTTAGATTTACAAGGAATTGAGAGTAAAACAAGAAAGGTCTCACAGTGGATTGATAGGCTTTTTGATTCTGTCATCGAGAAGCGAATGAATGTGACAGAGAACAGAGAAACTAAATCAGAAAAGAAAGATTTCCTGCAATATTTGTTGCAGGTGGAGTTTGAAAGCAGTGGTAGTCATTCAGCATCAATGACTATGAACGAGATCAAAGCTCTCCTCATAGATATAGTGATTGGTGGAACCGATACCTCATCAACGACATTGGAATGGGTGGTGGCAAGACTGTTGCAGAATCCAGAGGCAATGAAGAGAGTCCATGAAGAGTTGGATGCGGTAATAGGATTGGATAACTGTGTTGAATTAGAATCCCAGTTGTCCAAATTACATTACTTGGAAGCTGTCATAAAGGAAACACTTCGTTTGCATCCCCCTATCCCCTTTATACCCCGTTGCCCAAGCCAAACTAGCACTGTTGGTGGATACACCATACCCAAAGGAGCACAAGTATTCTTGAATGTGTGGACAATACACAGGGACCCTGAAATTTGGGAAGATGCATTGGAATTTCGACCAGAGAGGTTTCTAAGTGGTGATTCTGGCAAGTGGGGCAACAAATTTGAGTATCTTCCTTTTGGATCTGGAAGAAGAATTTGTGCTGGGCTACCTCTTGCAGAGAAGATGGTAATATTTATGCTAGCTTCCTTCTTGCATTCCTTTGAGTGGAGATTGCCTAGTGGCACAGTTCTTGAACTTTCAGGGGAAGTTGGCATTGTAATCAAGAAAATGAAGCCACTGATTGCTATTCCAAAACCTAGGCTATCTAAACCAGAACTCTATCAGTAA 1593 0.4357 MLLSSFGVTWPSWWWDSTNSKLTATLLVTLIVVLWLLWRFKSSINTSTLPSPLPPGPVGFPLVGYLPFLILGTHLHLKFDKLARVYGPIFKLMLGTKTFVVVSSPSLVKEIVRDQDTIFANRDPPIALLLSLYGGDDIASLPYGPQWKKARKILVRELLSNTNLSNSFSHRRVEIQKSIKHVYEEKIGCPVNVGELAFLTATNSIMSMIWGETLQGEEGAAIGVEFRALVSELMVLIGKPNISDVYPALAWLDLQGIESKTRKVSQWIDRLFDSVIEKRMNVTENRETKSEKKDFLQYLLQVEFESSGSHSASMTMNEIKALLIDIVIGGTDTSSTTLEWVVARLLQNPEAMKRVHEELDAVIGLDNCVELESQLSKLHYLEAVIKETLRLHPPIPFIPRCPSQTSTVGGYTIPKGAQVFLNVWTIHRDPEIWEDALEFRPERFLSGDSGKWGNKFEYLPFGSGRRICAGLPLAEKMVIFMLASFLHSFEWRLPSGTVLELSGEVGIVIKKMKPLIAIPKPRLSKPELYQ. 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g04458 530 Gene3D Cytochrome P450 48 526 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g04458 530 PANTHER OS08G0547900 PROTEIN 13 530 - -
Seca11g04458 530 PRINTS P450 superfamily signature 329 346 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g04458 530 PRINTS P450 superfamily signature 383 394 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g04458 530 PRINTS P450 superfamily signature 468 479 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g04458 530 PRINTS P450 superfamily signature 459 468 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g04458 530 SUPERFAMILY Cytochrome P450 54 522 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g04458 530 Pfam Cytochrome P450 54 508 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g04458 530 CDD CYP76-like 83 519 - -
Seca11g04458 530 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 461 470 IPR017972 GO:0005506|GO:0016705
Seca11g04458 530 FunFam Predicted protein 327 517 - -
Seca11g04458 530 PRINTS E-class P450 group I signature 318 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g04458 530 PRINTS E-class P450 group I signature 338 364 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g04458 530 PRINTS E-class P450 group I signature 200 218 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g04458 530 PRINTS E-class P450 group I signature 458 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g04458 530 PRINTS E-class P450 group I signature 422 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g04458 530 PRINTS E-class P450 group I signature 83 102 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g04458 530 PRINTS E-class P450 group I signature 107 128 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g04458 530 PRINTS E-class P450 group I signature 468 491 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g04458 530 PRINTS E-class P450 group I signature 382 400 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g04458 Seca-Chr11 126658767 126661269 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g04458 21 529 Cytochrome P450 AT4G12320 46.693 4.95e-165 476
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g04458 - - gmx:100785686 814.298