Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g04457 ATGCTGTTGAGTTCATTTGATGTCACATGGCCATGGTGGTTGTGGGACTCCAGTTCACAGCTGAGTCCAACCTTTCTGGTCACCCTGATTGGTGTGCTATGGTTACTATGGAGGTTCAAGAATTCAAGCAATGGAACCACCCTTCCATCTCCATTGCCTCCAGGTCCTTTTGGCTTGCCATTTGTTGGTTACCTTCCCTTTCTAGGAACCCAACCCCACATCAAATTTGATAAGCTTGTACGAGTTTATGGTCCTATCTTCAAGGTCATGTTGGGAACCAAAACTTACATAGTGGTTAGCTCACCTTCACTGGTGAAAGAGATAGTGCGTGACCAAGACACCATATTTGCCAACCGTGACCCTCCCATTTCTGCAATGATTGGCTTGTATGGTGGCACTGATATAGCCTCTTTGCCTCATGGTCCACAATGGAGGAAGGCTCGCAAGATATTTGTGCGTGAGTTGCTCAGCAATACAAACCTCAGTAACTCATTTTCTCATAGAAGGGTGGAGGTTAAGAAATCCATCAAACATGTGTATGAGGAGAAAATAGGGTGCCCTGTAAATGTTGGTGAGTTGGCTTTTCTAACAGCTACAAATGCAATAATGAGTATGATTTGGGGTGAGACTTTACAAGGTGAACAAGGGGCTGCTATTGGGGTTGAGTTTAGAGCATTGGTGTCAGAACTCATGGTGTTAATTGGGAATCCAAATATTTCAGATCTTTACCCCTCTATAGCCTGGTTAGATTTGCAAGGAATTGAAAGTAGAACGAGAAAAGTCTCACAGTGGATTGATAGGCTTTTTGATTCTGCCATTGAAAAGCGAATGAATGTGACAGGGAATGGAGAAATTAAGTCAGAGAAGAAAGATTTCCTGCAATATCTGTTGGAGGTGGAGCTTAAAAGAAGTGATAGTCATTCAGCATCAATGACTATGAACGAGATCAAAGCTCTCCTCATAGATGTAGTGGTGGGTGGAACCGAGACCACGTCAACAACATTGGAATGGGTGGTAGCAAGGTTGTTTCAGCATCCAGAGGCAATGAAGAGAGTCCATGAAGAGTTGGATGCAGTAATAGGATTGGATAACTGTGTTGAATTAGAATCCCAGTTGTCCAAATTACATTACTTAGAAGCTGTCATCAAGGAAACACTTCGTTTGCATCCCCCTCTTCCCTTTTTGATACCCCGTTGCCCAAGTCAAACTAGCATGGTTGGTGGATATACCATACCCAAAGGTGCACAAGTACTCTTGAATGTGTGGACCATACAAAGGGACCCTGAAATTTGGGAAGATGCATTGGAATTTCGACCAGAGAGGTTTCTAAGTGGTGATGCTGGCAAGTGGGGCAACAAATTTGAGTATCTTCCTTTTGGATCTGGAAGAAGAATTTGTGCTGGGCTACCTCTTGCAGAGAAGATGGTAATGTTTATGCTAGCTTCCTTCTTGCATTCCTTTGAGTGGAGATTGCCTAGTGGCACAGTGCTTGAATTTTCAGGAAAATTTGGCATTGTAATCAAGAAAATGAAGCCACTGATTGCTATTCCAAAGGCTAGGCTATCAAAACCAGAATTCTATCAATAA 1587 0.4297 MLLSSFDVTWPWWLWDSSSQLSPTFLVTLIGVLWLLWRFKNSSNGTTLPSPLPPGPFGLPFVGYLPFLGTQPHIKFDKLVRVYGPIFKVMLGTKTYIVVSSPSLVKEIVRDQDTIFANRDPPISAMIGLYGGTDIASLPHGPQWRKARKIFVRELLSNTNLSNSFSHRRVEVKKSIKHVYEEKIGCPVNVGELAFLTATNAIMSMIWGETLQGEQGAAIGVEFRALVSELMVLIGNPNISDLYPSIAWLDLQGIESRTRKVSQWIDRLFDSAIEKRMNVTGNGEIKSEKKDFLQYLLEVELKRSDSHSASMTMNEIKALLIDVVVGGTETTSTTLEWVVARLFQHPEAMKRVHEELDAVIGLDNCVELESQLSKLHYLEAVIKETLRLHPPLPFLIPRCPSQTSMVGGYTIPKGAQVLLNVWTIQRDPEIWEDALEFRPERFLSGDAGKWGNKFEYLPFGSGRRICAGLPLAEKMVMFMLASFLHSFEWRLPSGTVLEFSGKFGIVIKKMKPLIAIPKARLSKPEFYQ. 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g04457 528 Gene3D Cytochrome P450 40 519 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g04457 528 FunFam Predicted protein 324 515 - -
Seca11g04457 528 PRINTS P450 superfamily signature 457 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g04457 528 PRINTS P450 superfamily signature 326 343 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g04457 528 PRINTS P450 superfamily signature 466 477 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g04457 528 PRINTS P450 superfamily signature 380 391 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g04457 528 PANTHER OS08G0547900 PROTEIN 22 528 - -
Seca11g04457 528 Pfam Cytochrome P450 53 508 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g04457 528 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 459 468 IPR017972 GO:0005506|GO:0016705
Seca11g04457 528 SUPERFAMILY Cytochrome P450 53 520 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g04457 528 CDD CYP76-like 81 517 - -
Seca11g04457 528 PRINTS E-class P450 group I signature 315 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g04457 528 PRINTS E-class P450 group I signature 379 397 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g04457 528 PRINTS E-class P450 group I signature 104 125 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g04457 528 PRINTS E-class P450 group I signature 80 99 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g04457 528 PRINTS E-class P450 group I signature 335 361 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g04457 528 PRINTS E-class P450 group I signature 197 215 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g04457 528 PRINTS E-class P450 group I signature 466 489 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g04457 528 PRINTS E-class P450 group I signature 456 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g04457 528 PRINTS E-class P450 group I signature 420 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g04457 Seca-Chr11 126640161 126642803 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g04457 17 527 Cytochrome P450 AT4G12320 45.243 4.89e-167 481
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g04457 - - gmx:100785686 835.869