Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g04450 ATGGAGTCAACAACCCACAACTACAAGCTCCTCTTCATCATGAACCTCGTTTTCTTCTGCTTCTGCTTCATTCAAAGCTCTCTCTTAGTATCAGCTTCTTCACCATCTGCTTCAAGATCAACCCATACATTCCCCAAAGAAGCCCTCCCCACCAAATCTGGTTACCTCCCAGTGAGCCCCACATCCTCTTCCTCCATTTTCTACACTTTCTATGAAGCACAAAATTCCACTTCACCTCTCTCCCAAACCCCACTTCTCATTTGGCTCCAAGGTGGCCCTGGCTGCTCCTCCATGATCGGCAACTTCTTCGAGCTTGGACCCTGGCGTGTCACCAATTCCCTTACCCTTCAACCCAACCCTGCTGCTTGGAATCGAATCTTTGGCCTTCTTTTTCTTGATAATCCCATTGGAACTGGATTCAGCATAGCCTCAACACCAGAAGAAATCCCAACCGATCAAAACACCGTTGCCAAACACCTTTTTGCTGCTATAACAAGTTTTCTTCAACTTGACCCTGTTTTCGAGCATCGCCCAATTTATATTACTGGGGAAAGCTACGCTGGCAAGTATGTTCCTGCAATTGGGTATTACATATTGGAGAAAAATGCTGAGTTAAAGGTATCTGAGAGAGTGAATTTGGCTGGTGTGGCAATTGGGGATGGGTTAACAGACCCTGTAACTCAAGTGGTTACTCATGCTGCCAATGCTTACTATGTTGGATTAATCAATGAGAGGCAAAAGAACGAGTTGGAGAAAGCTCAATTAGAAGCTGTTAGGTTGATCCAAATAGGGAATTGGAGTGAAGCAACGGATGCGAGAAGAAAAGTCTTGGGAGTGTTGCGCAACATGACAGGGTTGGCTACTTTGTTTGACTATACAAGGAAAGCTCCTTATGAAGAGAATTTGGTTTCTCAGTTCTTGAACTCTGTTGAGGTGAAGAAAGCCTTTGGTGTGAATGAATCGTTTGTGTATGAGAGATGCAGTGATATTGTTAACGCTGCATTACATAATGATGTGATGAAAAGTGTGAAATATATGGTGGAACACTTGGTGAGGAGGAGCAGGGTGTTGTTATATCAAGGTCAGTATGATTTGAGCGATGGTGTGGTCCAAGTAGAAGCTTGGGTGAAGACAATGAAATGGGAAGGAACTGTGGAGTTTCTGAATGCTGAGAGGAAGATTTGGAAGGTAAATGGAGAGCTCGCTGGGTATGTGCAAAATTGGAAGTCTCTTACTAATGTTGTGGTTTTGGGGGCTGGGCATCTTTTGCCTCATGATCAGCCTGTGAATTCTCAAGCAATGATGGAAGACTGGGTTTTGGAAAGGGGTTTATTTAAAACTTGA 1344 0.4405 MESTTHNYKLLFIMNLVFFCFCFIQSSLLVSASSPSASRSTHTFPKEALPTKSGYLPVSPTSSSSIFYTFYEAQNSTSPLSQTPLLIWLQGGPGCSSMIGNFFELGPWRVTNSLTLQPNPAAWNRIFGLLFLDNPIGTGFSIASTPEEIPTDQNTVAKHLFAAITSFLQLDPVFEHRPIYITGESYAGKYVPAIGYYILEKNAELKVSERVNLAGVAIGDGLTDPVTQVVTHAANAYYVGLINERQKNELEKAQLEAVRLIQIGNWSEATDARRKVLGVLRNMTGLATLFDYTRKAPYEENLVSQFLNSVEVKKAFGVNESFVYERCSDIVNAALHNDVMKSVKYMVEHLVRRSRVLLYQGQYDLSDGVVQVEAWVKTMKWEGTVEFLNAERKIWKVNGELAGYVQNWKSLTNVVVLGAGHLLPHDQPVNSQAMMEDWVLERGLFKT. 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g04450 447 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 52 428 IPR001563 GO:0004185|GO:0006508
Seca11g04450 447 Pfam Serine carboxypeptidase 49 439 IPR001563 GO:0004185|GO:0006508
Seca11g04450 447 ProSitePatterns Serine carboxypeptidases, serine active site. 181 188 IPR018202 GO:0004185
Seca11g04450 447 Gene3D alpha/beta hydrolase 29 444 IPR029058 -
Seca11g04450 447 SUPERFAMILY alpha/beta-Hydrolases 50 439 IPR029058 -
Seca11g04450 447 PRINTS Carboxypeptidase C serine protease (S10) family signature 411 424 IPR001563 GO:0004185|GO:0006508
Seca11g04450 447 PRINTS Carboxypeptidase C serine protease (S10) family signature 119 131 IPR001563 GO:0004185|GO:0006508
Seca11g04450 447 PRINTS Carboxypeptidase C serine protease (S10) family signature 167 192 IPR001563 GO:0004185|GO:0006508
Seca11g04450 447 PRINTS Carboxypeptidase C serine protease (S10) family signature 132 142 IPR001563 GO:0004185|GO:0006508
Seca11g04450 447 Coils Coil 243 263 - -
Seca11g04450 447 FunFam Carboxypeptidase 35 446 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g04450 Seca-Chr11 126425365 126426708 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g04450 302 439 Calmodulin-binding Proteins AT2G22960 21.277 8.74e-09 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g04450 K09645 - gmx:102663282 724.546