Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g04444 ATGTCCACCGTTTCAATGGATCAGTTTGATGCTGATGGTACAATTACAAAAGGAGGATATTCCAGTTACATAGTAGTCCATGAAAGGTATTGCTTCATGATACCCAAAAATTATCCTTTGGCTTCAGCAGCTCCTTTGCTCTGTGCTGGAATCACAGTTTATTCTCCCATGATGCGCCACAAGATGAATCAACCTGGCAAGTCTCTAGGAGTGCTTGGTCTTGGTGGCCTTTCATATGGCAGTGAAATTTGGAAAGGAATTTGGGTTGAATGTAACGGTTTTCAGCTCTAG 291 0.4227 MSTVSMDQFDADGTITKGGYSSYIVVHERYCFMIPKNYPLASAAPLLCAGITVYSPMMRHKMNQPGKSLGVLGLGGLSYGSEIWKGIWVECNGFQL. 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g04444 96 SUPERFAMILY GroES-like 7 67 IPR011032 -
Seca11g04444 96 Gene3D - 6 48 - -
Seca11g04444 96 PANTHER ALDEHYDE REDUCTASE 5 78 IPR047109 GO:0016616
Seca11g04444 96 Gene3D - 49 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g04444 Seca-Chr11 126270844 126271349 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g04444 5 68 Monolignol Biosynthesis Gene Families AT1G72680 75.000 3.77e-31 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g04444 K00083 - gmx:100806165 125.176