Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g04441 ATGGAAATCACTAGCAGCCATAATAGCAGTAGCATGATGTGGTTTTTCAAGGATAGAGGGTTTGATGATAACAGCATACAAGGAATGTTTAGAAAATGCAAGCGTCTTGAGATTGTGCATCAGGAAAGAGCAAATGAGAACTGGGAGTATTTGAGAAGCATTGGCATTCAAGAAAGGAAATTGCCCTCAATTGTTTCAAAATGCCCTAAGATTCTTGCATTGGGTCTTAATGAGAAGATTGTGCCCATGGTTGAGTGTCTCAGGACACTAGGAACAAAACCCCATGAAGTTGCTTCTGCCATAGCCAAGTTCCCTCACATACTCTCACATAGTGTGGAGGAGAAGCTCTGTCCCCTTTTGGCCTTCTTTCAGGCATTAGGCGTCCCCGAAAAGCAAATTGGGAAAATCATACTGCTAAACCCTAGGCTTATCAGCTACAGCATTGAAACAAAGATGGCAGAAATTGTAGACTTCCTTGCCAGCCTTGGTCTGAAAAAAGATGGAATGATTGGAAAAGTTATAGTCAAGGATCCATTTATTATGGGTTATAGTGTTGATAAGAGGCTCCGCCCTACTTCAGAGTTTCTCAAGTCAATAGGTCTGACTGAGGAGGATCTTCAAGTGGTGGCTGTGAACTTCCCATCAATTTTGAGTAGAGATGTGAACAAGGTTTTGGAACCCAATTATGCTTATTTAAAGAAATGTGGATTTCAAGACAGACAGATAGTTGATTTGGTGGTTGGTTTTCCTCCTATCCTGATCAAGAGTATCCAGAATTCTTTAGAACCGAGGATCAAGTTTTTAGTAGATGTAATGGGGAGACAAGTTGATGAAGTCATTGATTATCCTTGCTTCTTTCGTCATGGCCTGAAGAAAAGATTAGAGTTGCGGCACAAACTTCTAAAGCAGAGGAATTTAAATTGTAGCTTGAGTGAAATGCTGGACTGTAATAAGAAGAAGTTCCTCATGAAGTTCGGCTTGTTAGAAGGACGCGCCTTGAGTAACTAG 1008 0.4097 MEITSSHNSSSMMWFFKDRGFDDNSIQGMFRKCKRLEIVHQERANENWEYLRSIGIQERKLPSIVSKCPKILALGLNEKIVPMVECLRTLGTKPHEVASAIAKFPHILSHSVEEKLCPLLAFFQALGVPEKQIGKIILLNPRLISYSIETKMAEIVDFLASLGLKKDGMIGKVIVKDPFIMGYSVDKRLRPTSEFLKSIGLTEEDLQVVAVNFPSILSRDVNKVLEPNYAYLKKCGFQDRQIVDLVVGFPPILIKSIQNSLEPRIKFLVDVMGRQVDEVIDYPCFFRHGLKKRLELRHKLLKQRNLNCSLSEMLDCNKKKFLMKFGLLEGRALSN. 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g04441 335 Gene3D Transcription termination factor 3, mitochondrial 95 329 IPR038538 -
Seca11g04441 335 PANTHER CGI-12 PROTEIN-RELATED 132 253 IPR003690 GO:0003690|GO:0006355
Seca11g04441 335 FunFam transcription termination factor MTERF6, chloroplastic/mitochondrial 97 329 - -
Seca11g04441 335 Pfam mTERF 111 322 IPR003690 GO:0003690|GO:0006355
Seca11g04441 335 Pfam mTERF 7 167 IPR003690 GO:0003690|GO:0006355
Seca11g04441 335 SMART mt_12 134 165 IPR003690 GO:0003690|GO:0006355
Seca11g04441 335 SMART mt_12 171 202 IPR003690 GO:0003690|GO:0006355
Seca11g04441 335 SMART mt_12 276 307 IPR003690 GO:0003690|GO:0006355
Seca11g04441 335 SMART mt_12 207 238 IPR003690 GO:0003690|GO:0006355
Seca11g04441 335 SMART mt_12 243 275 IPR003690 GO:0003690|GO:0006355
Seca11g04441 335 SMART mt_12 98 129 IPR003690 GO:0003690|GO:0006355
Seca11g04441 335 SMART mt_12 62 93 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g04441 Seca-Chr11 126229294 126230301 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Seca11g04441 mTERF 2.7e-46 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g04441 K15032 - gmx:100816929 587.415