Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g04440 ATGCTCCTCAAACCACAAGAATCAAAAGACCAACAACAACAACATTCCAATAGTTCTCTTCTAATGGAGCCTAATAATGCTTGCAGCATGCATTCACATTGCATAGAAATGTCTATGGAAGTACACCAAGTTGTTCCTCCACCTCACAAGAGCACCTTACAGAAGCTCAAGGGAAGGTTCAAGGAAACTTTTTTCCCTGATGATCCTCTGCGCCAATTCAAGGGACAACCACTTAAGAGAAAACTAATCCTTGGTGCTCAATATTTGTTCCCTATTCTTCAATGGGGTCCTAGTTACAGCTTCAAACTCTTTAAATCTGACCTTGTTGCTGGCCTCACTATTGCTAGCTTGGCCATCCCACAGGGAATCAGTTATGCTAAGCTTGCAAATCTTCCTCCAATTGTGGGACTCTATTCTAGTTTTGTTCCCCCACTTGTTTATGCTGTTCTTGGAAGTTCAAGGGACCTAGCAGTAGGACCTGTTTCTATTGCTTCTCTTGTGTTGGGCTCTATGCTAAGGCAGGAAGTGTCTCCCACAGCAGACCCAGTTCTGTTTCTTCAACTAGCTTTTACTTCAACATTCTTTGCTGGTCTATTTCAAGCTTCTCTTGGAATCCTGAGGCTAGGATTTATCATTGATTTTCTATCTAAGGCCATCCTTATTGGGTTCATGGCTGGTGCTGCTATAATTGTCTCTCTTCAACAGCTTAAGAGCCTCCTTGGAATCAAACATTTCACTACAAAGATGGGCTTGATTCCTGTTATGAGTTCTGTTTTTCACAATATACATGAGTGGTCCTGGGAAACAATATTGATGGGAATTTGCTTCTTAGTGCTGTTACTACTAGCAAGACACGTTAGCATAAGGAAACCAAAGCTTTTCTGGGTCTCAGCTGGAGCTCCTCTTGTGTCTGTCATAATCTCCACTCTTGTGGTTTTTGCAATGAAGGGTCAAAATCATGGCATCAGTGTAATTGGAAAATTGCAAGAAGGAATAAATCCTCCTTCATGGAATATGTTGCGCTTACATGGCAGTCACCTTGGTCTAGTCATGAAAGCTGGCCTTATCACTGGCATTTTGTCCCTCACTGAAGGTATTGCAGTAGGAAGGACATTTGCAGCTCTTAGAAACTACAAAGTGGATGGAAATAAGGAAATGATGGCAATTGGGTTTATGAATGTTGTTGGCTCCTTCACTTCCTGCTATGTTACAACAGGTGCTTTCTCTAGGTCAGCTGTTAATAATAATGCAGGTGCAAAAACAGCAGCATCAAATATAGTTATGTCTGTGACAGTCATGGTGACACTGCTGTTTCTTATGCCATTGTTCCAGTACACACCTAATGTTGTATTGGGGGCTATCATAGTTACAGCAGTGATTGGTCTCATTGATATCCCTGCTGCTTGTCACATTTGGAAGATAGACAAATTCGATTTCCTTGTGATGTTGACTGCTTTCTTGGGTGTTATTTTTATCTCAGTCCAAGAAGGCCTTGCTCTTGCAGTTGGGTTATCAACTTTTAGGATACTCCTACAAATTACAAGGCCAAAAACAGTAATGTTGGGGAAGATACCAGGGACAGACATATATAGAAATCTTCATCAATATAAGGAAGCTGTAAGAGTACCAGGTTTTCTTTTATTAAGCATTGAGGCTCCTATCAATTTCGCTAACATCACATATCTCAATGAGAGGACAATACGATGGATTGAAGATGAAGAAGAAGGAGATAACATAAAGGAAGACTCGAGCCTTCGATTTTTAATCCTTGATATGTCAGCTGTGAGTGCCATTGACACAAGTGGAATCTCACTTTTCAAGGAGTTGAAAACAACAGTGGAAAAGAAGGGTGTTGAGGCAAGGAAGCTAAACTCTTGTCTTGGTGAATCCTCTTGCTGA 1899 0.4107 MLLKPQESKDQQQQHSNSSLLMEPNNACSMHSHCIEMSMEVHQVVPPPHKSTLQKLKGRFKETFFPDDPLRQFKGQPLKRKLILGAQYLFPILQWGPSYSFKLFKSDLVAGLTIASLAIPQGISYAKLANLPPIVGLYSSFVPPLVYAVLGSSRDLAVGPVSIASLVLGSMLRQEVSPTADPVLFLQLAFTSTFFAGLFQASLGILRLGFIIDFLSKAILIGFMAGAAIIVSLQQLKSLLGIKHFTTKMGLIPVMSSVFHNIHEWSWETILMGICFLVLLLLARHVSIRKPKLFWVSAGAPLVSVIISTLVVFAMKGQNHGISVIGKLQEGINPPSWNMLRLHGSHLGLVMKAGLITGILSLTEGIAVGRTFAALRNYKVDGNKEMMAIGFMNVVGSFTSCYVTTGAFSRSAVNNNAGAKTAASNIVMSVTVMVTLLFLMPLFQYTPNVVLGAIIVTAVIGLIDIPAACHIWKIDKFDFLVMLTAFLGVIFISVQEGLALAVGLSTFRILLQITRPKTVMLGKIPGTDIYRNLHQYKEAVRVPGFLLLSIEAPINFANITYLNERTIRWIEDEEEGDNIKEDSSLRFLILDMSAVSAIDTSGISLFKELKTTVEKKGVEARKLNSCLGESSC. 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g04440 632 MobiDBLite consensus disorder prediction 1 22 - -
Seca11g04440 632 Gene3D STAS domain 515 624 IPR036513 -
Seca11g04440 632 SUPERFAMILY SpoIIaa-like 541 620 IPR036513 -
Seca11g04440 632 NCBIfam sulfate permease 91 623 IPR001902 GO:0016020|GO:0055085
Seca11g04440 632 ProSiteProfiles STAS domain profile. 535 619 IPR002645 -
Seca11g04440 632 PANTHER SULFATE TRANSPORTER 51 619 IPR001902 GO:0016020|GO:0055085
Seca11g04440 632 ProSitePatterns SLC26A transporters signature. 133 154 IPR018045 GO:0008271|GO:0008272
Seca11g04440 632 Pfam STAS domain 536 619 IPR002645 -
Seca11g04440 632 Pfam Sulfate permease family 104 484 IPR011547 GO:0016020
Seca11g04440 632 CDD STAS_SulP_like_sulfate_transporter 536 619 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g04440 Seca-Chr11 126219252 126226744 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g04440 21 619 Inorganic Solute Cotransporters AT3G15990 65.557 0.0 804
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g04440 K17471 - gmx:100787284 1087.4