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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Seca11g04432
ATGGGACGCGTGAGGACAAAGACAGTGAAGAAGTCATCTCGTCAAGTAATAGAGAGATACTACTCTCGCATGACACTCGACTTCCACACCAACAAGAAGGTTCTAGAAGAGGTAGCTATTATACCTTCCAAGAGGCTCCGAAACAAGATCGCTGGCTTCTCCACTCACCTCATGAAGCGAATTCAGAAAGGTCCCGTTCGTGGCATCTCCCTCAAGCTCCAGGAAGAAGAGCGTGAACGCCGCATGGACTTCGTTCCCGAAGTTTCCGCCATTAACACCGAAAACATTCAGGTCGATAAGGAGACACTTGACATGCTCCATGCCCTTGGACTCAATGACATCCCTGGTATCACACAGGTTGATCCTGTCCCTCTCCCAGTTTTTCCTTCTAGGAGGTATTAA
402
0.4876
MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKVLEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPEVSAINTENIQVDKETLDMLHALGLNDIPGITQVDPVPLPVFPSRRY.
134
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Seca11g04432
133
Pfam
Ribosomal S17
1
120
IPR001210
GO:0003735|GO:0005840|GO:0006412
Seca11g04432
133
FunFam
40S ribosomal protein S17
1
62
-
-
Seca11g04432
133
Gene3D
-
1
62
IPR036401
GO:0003735|GO:0005840|GO:0006412
Seca11g04432
133
Hamap
30S ribosomal protein S17e [rps17e].
1
63
IPR001210
GO:0003735|GO:0005840|GO:0006412
Seca11g04432
133
PANTHER
40S RIBOSOMAL PROTEIN S17
1
121
IPR001210
GO:0003735|GO:0005840|GO:0006412
Seca11g04432
133
ProSitePatterns
Ribosomal protein S17e signature.
41
56
IPR018273
GO:0003735|GO:0005840|GO:0006412
Seca11g04432
133
SUPERFAMILY
Rps17e-like
1
62
IPR036401
GO:0003735|GO:0005840|GO:0006412
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Seca11g04432
Seca-Chr11
125982737
125983138
Dispersed/Wgd
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Seca11g04432
1
133
Cytoplasmic Ribosomal Protein Gene Family
AT2G04390
78.723
5.44e-76
220
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Seca11g04432
K02962
-
gmx:100527036
238.81
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