Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g04404 ATGGCTATTGAAATAATTGATCTAACGAATTCACCCCCATCACCACCCAGGTCATCATCTAAGGCACTAATGGTCCTTAATTCTGGTGTTGTTTCTGCAGAGAATGTTCAATTCAAAAAATTTCATATGTCCTCATGGGCTTGCGTGAATCCTACTCTTCACCACACCAACCATCACCAAACTACCCTGTGGCCAGCTTCAGGACACACCCATGAGCCCTCTCAGAGTATCACTACATGGTTCCAACCGAACATGAATGGTCATTGGGTTTCTACGATTCTTGAACCGGTTCACAAATTAGGCACATTCTCGTTTCCTCATGGAGCTAGGCTCAAGGAGCCTTGGACTCAGAGAGAGCATGAGTTATTTCTGATGGGACTAATTAAGTATGGAAAAGGACATTGGACCAAAATTTCTAGACACCTTTTGTGGAACAAGACACCACAACAAGTTCAAAGCTATGCTGCTAGCTTCTTCAAGATCCTACAAGCCACATACTTATATGCATCTAAGAGAAGGAAACCCGTCAACTACTCTGCTGGTAGCCTTATGGATAGAAATAGGAATCTCATGGATGCAACTACCTCATATTCAATGCAAATGGTTCTTAATGAACCACAACGAACCCTCACTCTCTTCCCAGAGAAAACTCCTTTCTCTCAGGTTCCACCATTCGAAGAAGGTATCAGGAGTAGTAACCGTATCGATGGGTTCCAAATGCTAACAAATAGTGCAACCACTTCCATGACTGCTAGTGCTAATGGAGAAGTTGATTTAGAGCTTCGCTTAGGACGATGCTAG 801 0.432 MAIEIIDLTNSPPSPPRSSSKALMVLNSGVVSAENVQFKKFHMSSWACVNPTLHHTNHHQTTLWPASGHTHEPSQSITTWFQPNMNGHWVSTILEPVHKLGTFSFPHGARLKEPWTQREHELFLMGLIKYGKGHWTKISRHLLWNKTPQQVQSYAASFFKILQATYLYASKRRKPVNYSAGSLMDRNRNLMDATTSYSMQMVLNEPQRTLTLFPEKTPFSQVPPFEEGIRSSNRIDGFQMLTNSATTSMTASANGEVDLELRLGRC. 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g04404 266 Pfam Myb-like DNA-binding domain 112 154 IPR001005 -
Seca11g04404 266 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 86 199 IPR043363 -
Seca11g04404 266 SMART sant 111 161 IPR001005 -
Seca11g04404 266 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 112 163 IPR017930 -
Seca11g04404 266 ProSiteProfiles SANT domain profile. 110 163 IPR017884 -
Seca11g04404 266 Gene3D - 113 164 - -
Seca11g04404 266 SUPERFAMILY Homeodomain-like 114 160 IPR009057 -
Seca11g04404 266 CDD SANT 114 155 IPR001005 -
Seca11g04404 266 ProSiteProfiles Myb-like domain profile. 112 159 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g04404 Seca-Chr11 125315457 125316716 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Seca11g04404 Myb_DNA-binding 1e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g04404 - - gmx:102663307 253.447