Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g04380 ATGGCATTAACATGTGATGCTTGTGGTTACCGCAACTCTGAGTTGAAACCTGGTGGACGAATTCCTGAAAAAGGAAAAAGGATTACTCTTTTTGTGAAAAATGTTAATGACCTGAGCCGTGATGTAATAAAGTCTGATACTGCAAGTGTAAAAGTTCCTGAACTTGACTTGGAGCTGGCAAGCGGCACCCTCGGAGGAATTGTTACAACTGTTGAAGGTTTAATTACAAAAATTAGTGAAAGCCTTGAGAGGGTCCATGGGTTTACTTTTGGAGATAGTCTTGATGAACATAGAAGAAGCAAGTGGCTAGACTTTAAAGCAAGGCTAAACAAGCTTCTTAGCTTGGAAGAAGCTTGGACTCTCATTCTTGATGATGCATTAGCCAATTCTTTTGTAGCACCTGCAACTGATGATCTAAAAGACGACGATCAATTAACATTCGAGGAATATGAGAGGTCATGGGAGCAAAATGAAGAATTAGGTCTGAATGATATGGACACCTCTACTGCCGATGCTGCTTATGACTCAACAAATGCTACCAAAGTTGAGTGA 552 0.404 MALTCDACGYRNSELKPGGRIPEKGKRITLFVKNVNDLSRDVIKSDTASVKVPELDLELASGTLGGIVTTVEGLITKISESLERVHGFTFGDSLDEHRRSKWLDFKARLNKLLSLEEAWTLILDDALANSFVAPATDDLKDDDQLTFEEYERSWEQNEELGLNDMDTSTADAAYDSTNATKVE. 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g04380 183 Gene3D ZPR1, A/B domain 20 162 IPR042451 -
Seca11g04380 183 PANTHER ZINC FINGER PROTEIN ZPR1 1 177 IPR040141 -
Seca11g04380 183 MobiDBLite consensus disorder prediction 158 183 - -
Seca11g04380 183 SMART zpr1 1 134 IPR004457 GO:0008270
Seca11g04380 183 MobiDBLite consensus disorder prediction 160 183 - -
Seca11g04380 183 FunFam Zinc finger protein ZPR1 20 162 - -
Seca11g04380 183 Pfam ZPR1 zinc-finger domain 1 132 IPR004457 GO:0008270
Seca11g04380 183 NCBIfam ZPR1 zinc finger domain 1 166 IPR004457 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g04380 Seca-Chr11 124308292 124315142 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g04380 1 182 C2H2 Transcription Factor Family AT5G22480 76.923 1.08e-101 300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g04380 K06874 - gmx:100798741 337.806