Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g04371 ATGGCCACTTCAATAACTCTTCTCAACATGTTATCTGTAATCTTCATCCTCATCACTCTTTTCACATCCCAAGCATTGGCTGATTGTGCAACAGAATCAGTAGATAGTTGCAATAACAAAGAAAAAGCTCTGACTCTTAAAATCATAGCCATTTTTGCCATATTAGTCACTAGCATGATTGGTGTGTGCTTACCCTTGATGACACGTTCAGTCCCTGCCTTAAGCCCTGAGAGCAATCTCTTCATAATAGTGAAGTGCTTTGCAGCTGGTATTATTCTAGGGACAGGGTTCATGCATGTGCTTCCTGATTCATTTGACATGCTTTGGTCAGATTGCTTGCAAGAGAAACCATGGCATGAGTTTCCATTTTCAGGACTTGTGGCTATGTTCTCTGCTGTTATCACAATGATGGTTGACTCTTTGGCTACTAGTATTTATAGCAAAAAGGCTAAAACTGAAGTTATTCCAGAGAGGAGCCCTGCAGGTGGGGATCAAGAGATGGGTGTTGTCAATTTTGGGCATTTCCATGGTCACCAACACTCTCACCATGATGTCAAGACAGATAGTGCAGAGTCACAGCTTCTGCGTTACCGTGTAGTCGCCATGGTATTAGAACTTGGAATTGTTGTTCATTCAGTGGTGATAGGACTTTCCATGGGAGCCTCAAATAACACATGCACAATTAAAGGTCTTGTGGCTGCCCTTTGCTTCCATCAAATGTTTGAAGGCATGGGTCTTGGTGGCTGCATTCTCCAGGCTGAGTACAATTTTTTGAAGAAGGCTATCATGGTGTTCTTCTTCTCAGTTACAACCCCACTTGGAATTGCCTTAGGAATTGCAATGTCCACCACCTACAAAGAGAACAGTCCAAATGCACTCATCACTGTTGGGTTGCTTAATGCATCATCTGCTGGTCTTTTAATCTACATGGCTTTGGTTGACCTGCTCTCTGCTGATTTTATGAGTCCAAGGTTGCAGGGAAGCATTAAGCTTCAATTAAAATCTTACATAGCGGTATTTTTGGGTGCTGGTGGCATGTCTCTCATGGCAAAATGGGCCTAA 1062 0.4275 MATSITLLNMLSVIFILITLFTSQALADCATESVDSCNNKEKALTLKIIAIFAILVTSMIGVCLPLMTRSVPALSPESNLFIIVKCFAAGIILGTGFMHVLPDSFDMLWSDCLQEKPWHEFPFSGLVAMFSAVITMMVDSLATSIYSKKAKTEVIPERSPAGGDQEMGVVNFGHFHGHQHSHHDVKTDSAESQLLRYRVVAMVLELGIVVHSVVIGLSMGASNNTCTIKGLVAALCFHQMFEGMGLGGCILQAEYNFLKKAIMVFFFSVTTPLGIALGIAMSTTYKENSPNALITVGLLNASSAGLLIYMALVDLLSADFMSPRLQGSIKLQLKSYIAVFLGAGGMSLMAKWA. 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g04371 353 PANTHER ZINC/IRON TRANSPORTER 43 350 - -
Seca11g04371 353 NCBIfam ZIP zinc/iron transport family 29 353 IPR004698 GO:0005385|GO:0016020|GO:0071577
Seca11g04371 353 Pfam ZIP Zinc transporter 45 350 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g04371 Seca-Chr11 123875959 123877715 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g04371 23 353 Inorganic Solute Cotransporters AT1G31260 65.000 2.82e-159 449
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g04371 K14709 - gmx:100795511 571.237