LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Seca11g04371	ATGGCCACTTCAATAACTCTTCTCAACATGTTATCTGTAATCTTCATCCTCATCACTCTTTTCACATCCCAAGCATTGGCTGATTGTGCAACAGAATCAGTAGATAGTTGCAATAACAAAGAAAAAGCTCTGACTCTTAAAATCATAGCCATTTTTGCCATATTAGTCACTAGCATGATTGGTGTGTGCTTACCCTTGATGACACGTTCAGTCCCTGCCTTAAGCCCTGAGAGCAATCTCTTCATAATAGTGAAGTGCTTTGCAGCTGGTATTATTCTAGGGACAGGGTTCATGCATGTGCTTCCTGATTCATTTGACATGCTTTGGTCAGATTGCTTGCAAGAGAAACCATGGCATGAGTTTCCATTTTCAGGACTTGTGGCTATGTTCTCTGCTGTTATCACAATGATGGTTGACTCTTTGGCTACTAGTATTTATAGCAAAAAGGCTAAAACTGAAGTTATTCCAGAGAGGAGCCCTGCAGGTGGGGATCAAGAGATGGGTGTTGTCAATTTTGGGCATTTCCATGGTCACCAACACTCTCACCATGATGTCAAGACAGATAGTGCAGAGTCACAGCTTCTGCGTTACCGTGTAGTCGCCATGGTATTAGAACTTGGAATTGTTGTTCATTCAGTGGTGATAGGACTTTCCATGGGAGCCTCAAATAACACATGCACAATTAAAGGTCTTGTGGCTGCCCTTTGCTTCCATCAAATGTTTGAAGGCATGGGTCTTGGTGGCTGCATTCTCCAGGCTGAGTACAATTTTTTGAAGAAGGCTATCATGGTGTTCTTCTTCTCAGTTACAACCCCACTTGGAATTGCCTTAGGAATTGCAATGTCCACCACCTACAAAGAGAACAGTCCAAATGCACTCATCACTGTTGGGTTGCTTAATGCATCATCTGCTGGTCTTTTAATCTACATGGCTTTGGTTGACCTGCTCTCTGCTGATTTTATGAGTCCAAGGTTGCAGGGAAGCATTAAGCTTCAATTAAAATCTTACATAGCGGTATTTTTGGGTGCTGGTGGCATGTCTCTCATGGCAAAATGGGCCTAA	1062	0.4275	MATSITLLNMLSVIFILITLFTSQALADCATESVDSCNNKEKALTLKIIAIFAILVTSMIGVCLPLMTRSVPALSPESNLFIIVKCFAAGIILGTGFMHVLPDSFDMLWSDCLQEKPWHEFPFSGLVAMFSAVITMMVDSLATSIYSKKAKTEVIPERSPAGGDQEMGVVNFGHFHGHQHSHHDVKTDSAESQLLRYRVVAMVLELGIVVHSVVIGLSMGASNNTCTIKGLVAALCFHQMFEGMGLGGCILQAEYNFLKKAIMVFFFSVTTPLGIALGIAMSTTYKENSPNALITVGLLNASSAGLLIYMALVDLLSADFMSPRLQGSIKLQLKSYIAVFLGAGGMSLMAKWA.	354

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Seca11g04371	353	PANTHER	ZINC/IRON TRANSPORTER	43	350	-	-
	Seca11g04371	353	NCBIfam	ZIP zinc/iron transport family	29	353	IPR004698	GO:0005385\|GO:0016020\|GO:0071577
	Seca11g04371	353	Pfam	ZIP Zinc transporter	45	350	IPR003689	GO:0016020\|GO:0030001\|GO:0046873\|GO:0055085

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Seca11g04371	Seca-Chr11	123875959	123877715	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Seca11g04371	23	353	Inorganic Solute Cotransporters	AT1G31260	65.000	2.82e-159	449

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Seca11g04371	K14709		-	gmx:100795511	571.237

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