Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g04319 ATGGGGTTTCAATTCTACAATGATTATGCTCAGAAAAGGGGATTTGCAGCTAGAAAATGGAACATTGTAAAAAACAAGATGGGTGAGATCACACAACAGACATTTGTTTGTTTCAAGGAGGGTTACAGGCAGAAGAAGCATATAAAGAGGACTAACCGCAAGAGGGAACCGAGAGCAATGACTAGGTGTGGTTGTGACGTTTTTTTAGGGTGCGATTTTTAG 222 0.4054 MGFQFYNDYAQKRGFAARKWNIVKNKMGEITQQTFVCFKEGYRQKKHIKRTNRKREPRAMTRCGCDVFLGCDF. 74
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g04319 73 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 3 66 - -
Seca11g04319 73 Pfam FAR1 DNA-binding domain 4 69 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g04319 Seca-Chr11 122708006 122708227 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca11g04319 FAR1 3.8e-13 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g04319 - - tdc:119326269 83.9593