Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g04315 ATGGTCTCACTGAAGCTGCAAAAAGGGCTCGCCGCCTGTGTTCTCAAGTGCGGAAGAGGCAAAGTTTGGCTTGATCCAAATGAAGTCAATGAAATCTCCATGGCCAATTCTCGTACACACTCTCTTTCTCTCTCTTTTTCTTAG 144 0.4583 MVSLKLQKGLAACVLKCGRGKVWLDPNEVNEISMANSRTHSLSLSFS. 48
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g04315 47 Pfam Ribosomal protein L19e 4 39 IPR000196 GO:0003735|GO:0005840|GO:0006412
Seca11g04315 47 Gene3D - 2 45 IPR015972 GO:0003735|GO:0005840|GO:0006412
Seca11g04315 47 SUPERFAMILY Ribosomal protein L19 (L19e) 3 39 IPR035970 GO:0003735|GO:0005840|GO:0006412
Seca11g04315 47 PANTHER 60S RIBOSOMAL PROTEIN L19 1 39 IPR039547 GO:0003723|GO:0003735|GO:0022625
Seca11g04315 47 FunFam Ribosomal protein L19 1 44 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g04315 Seca-Chr11 122665878 122666021 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g04315 1 38 Cytoplasmic Ribosomal Protein Gene Family AT3G16780 78.947 6.76e-16 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g04315 K02885 - pvy:116135575 73.559