Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g04306 ATGGAAGAAGTTTGCCTGAATAATGAGCCACTTTTTGATGAAAGTGATGAGTTTGATGTTGAGGGGAACTCTTCTGTAGTAGAACATGATCTTGAATCTTTAAACTCACAACCAAAGAACTCTCCACTTCCAACTATGGGTCTGGAGTTTGATTCCTTTGAAGACGTTTATAACTTCTACAATATCTATGCAAAGGAACAAGGCTTTGGCATTAGAGTGAGCAATTCATGGTTTAGGTCAAAGAGAAAAGAGCGCTATAGGGCAAAACTTAGCTGCAGTAGTGCTGGTTTCAAGAAAAAGAGTGAGGCCAATAATCCAAGACCAGAAACAAGAACTGGTTGTCCTGCAATGATAGTGATTAAAATGGTTGACTCCAAGAGATGGAGGATAGTGGAAGTTGAGCTTCAACACAACCATCAAGTGAGTCCACAGAGCAAACGGTTCTACAAGTCACATAAGAAAATGATCCTTGCAGCCAGAAAATCACAACCACTGCCAGAGCCTGTAACAGAAGTACATACCATCAAGTTATATCGAACAACTGTCATGGATGTTAGTCAGAATGGTTACTCTAACTTTGAAGAAAGTAATGACACAAATTTTGATAAGTTTAAATATTTGGAACTTAGAGAAGGGGATGCCAATGCTATATATAATTATTTTTGCCGAATGAAGTTGACTAATCCAAATTTCTTTTACTTGTTTGATATTGATGATGATGGGGGCCTAAAAAATGTGTTCTGGGCTGATTCCAGGTCAAGGGTTGCTTATAATTACTTCAATGACACTATTACCATAGACACAACTTGTTTGGCAAACAAATATGAGATCCCTTTGATATCATTTGTGGGTGTAAACCATCATGGACATTCTGTACTATTGGGCTGTGGCTTCCTTGGACATGAATCAGTGGATTATTTTGTGTGGATATTCAAGGCATGGCTTGAGTGTATGCTTGGTCGTCCTCCTCAAGTCATTATTACTGATCAGTGCAAGCCCTTGAAAATTGCAGTTGCTCAGGTTTTCCCTCATGCTCGTCATTGTTATTCTTCACAGTATATCATGCAAAGAGTTCCAGAAAAGTTGGGAGGGTTGCAAGGGTACGAAGCAATCAGAAAGCAGCTGTATAGTACTGTCTATCAGTCATTGAAGATAAGTGAGTTTGAAACTTCTTGGGATGATATGATTAAATGTTATGGACTTGGAGAAAACAAGTGGCTTCAGACATTACATAAAGATAGGCATCTGTGGGTTCCAGTTTACCTAAAAGACACTATTTTTATAGGACTGATCCCAACTAAAGAAAACGAGGGCCTGACTGCATTTTTTGATGGATATGTGCATAAACATACATCTTTCAAGGAATTTCTTGACAAGTATGACTTAGCTCTGCACAGAAAGCACTTGAAAGAAGCCATGGCTGATTTGGAGTCTAGACAATCAAGCTTTGAATTGAACACCAGATGTAATTTTGAGGTGCAGCTTTCCAAGGTGTATACAAAAGAAATCTTCAAAAAGTTTCAATCTGAGGTTGAGGGCGTGTACTCTTGCTTCAACACAAGACAGGTAAGTGTAAATGGATCTATAATAACATATGTTGTGAAAGAACGAGTTGAAGTTGAGGGAAATGAAAAGGGAGTTAAAAGTTTTGAAGTTTTATATGAGACCACAGGAATGGATATTCGTTGCATTTGCAGTTTGTTCAATTACAAAGGATATCTATGTAGACATGCATTGAATGTTCTCAATTATAATGGTATTGAGGAAGTCCCATCTCGATACATCCTGCAACGGTGGAAGAGGGATTTCAAGCAAAGGTGTAATCAATACCATGTCTCTGGTAATGATGATATGTATAACCCTATGTGCTGGTATACTCATCTGTTTAACAATGCCCTTCCAGTGTTAGAAGTAGGGGCACAGTCACAGGAGCATTATATGATTGCTTTAAAAGAACTTGAGGAGTTGTTAGTGAAGTTTGATATAGTGGATAGTAACTTGCTGTAA 2007 0.3817 MEEVCLNNEPLFDESDEFDVEGNSSVVEHDLESLNSQPKNSPLPTMGLEFDSFEDVYNFYNIYAKEQGFGIRVSNSWFRSKRKERYRAKLSCSSAGFKKKSEANNPRPETRTGCPAMIVIKMVDSKRWRIVEVELQHNHQVSPQSKRFYKSHKKMILAARKSQPLPEPVTEVHTIKLYRTTVMDVSQNGYSNFEESNDTNFDKFKYLELREGDANAIYNYFCRMKLTNPNFFYLFDIDDDGGLKNVFWADSRSRVAYNYFNDTITIDTTCLANKYEIPLISFVGVNHHGHSVLLGCGFLGHESVDYFVWIFKAWLECMLGRPPQVIITDQCKPLKIAVAQVFPHARHCYSSQYIMQRVPEKLGGLQGYEAIRKQLYSTVYQSLKISEFETSWDDMIKCYGLGENKWLQTLHKDRHLWVPVYLKDTIFIGLIPTKENEGLTAFFDGYVHKHTSFKEFLDKYDLALHRKHLKEAMADLESRQSSFELNTRCNFEVQLSKVYTKEIFKKFQSEVEGVYSCFNTRQVSVNGSIITYVVKERVEVEGNEKGVKSFEVLYETTGMDIRCICSLFNYKGYLCRHALNVLNYNGIEEVPSRYILQRWKRDFKQRCNQYHVSGNDDMYNPMCWYTHLFNNALPVLEVGAQSQEHYMIALKELEELLVKFDIVDSNLL. 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g04306 668 Pfam FAR1 DNA-binding domain 58 142 IPR004330 -
Seca11g04306 668 Pfam MULE transposase domain 264 356 IPR018289 -
Seca11g04306 668 Pfam SWIM zinc finger 559 583 IPR007527 GO:0008270
Seca11g04306 668 ProSiteProfiles Zinc finger SWIM-type profile. 550 586 IPR007527 GO:0008270
Seca11g04306 668 SMART 26again6 561 588 IPR006564 GO:0008270
Seca11g04306 668 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 34 659 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g04306 Seca-Chr11 122519899 122521905 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca11g04306 MULE 9.1e-22 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g04306 K17604 - gmx:100811666 1232.24