Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g04243 ATGGTGACACACAGACTGAAATGGTCTTCTTTGGGGGTGCGTGTCTTCTCCTATAAGGAGCTTCAAGAAGCAACAAACAATTTTGACCGCATTAGAAAGCTAGGAGATGGAGGTTTTGGCACTGTTTACTACGGAAAACTTAAAGATGGAAGAGAAGTTGCAGTCAAGCACCTATTTGAGCATAATTACAGAAGAGTGGAACAGTTTATAAATGAAATTGAAGTCCTGAGTCGGTTGCGCCACAGAAACCTTGTGTCCCTTTATGGCTGCACTTCACGTCACACGAATTCAGCGGGTGGAACTATATGGATTTCCCCTCTAAGAAAATGGGTTTCTATCATTTGCTCTGTTACATGTTTATAA 363 0.416 MVTHRLKWSSLGVRVFSYKELQEATNNFDRIRKLGDGGFGTVYYGKLKDGREVAVKHLFEHNYRRVEQFINEIEVLSRLRHRNLVSLYGCTSRHTNSAGGTIWISPLRKWVSIICSVTCL. 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g04243 120 ProSitePatterns Protein kinases ATP-binding region signature. 34 56 IPR017441 GO:0005524
Seca11g04243 120 Pfam Protein kinase domain 29 96 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca11g04243 120 SUPERFAMILY Protein kinase-like (PK-like) 8 95 IPR011009 -
Seca11g04243 120 Gene3D Phosphorylase Kinase; domain 1 2 98 - -
Seca11g04243 120 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 9 96 IPR044652 GO:0004672
Seca11g04243 120 ProSiteProfiles Protein kinase domain profile. 28 120 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g04243 Seca-Chr11 120802540 120802985 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g04243 13 95 Receptor kinase-like Gene Family AT1G25390 74.699 2.04e-40 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Seca11g04243 Pkinase 3.1e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g04243 - - aip:107616167 159.073