Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g04216 ATGACACAACGAGTCAAGCAGTATGCATCTCTTGAAGAGAGGAACTGGCAAAAAGCCATGGAATTCTATGGGCCTAAAACACATCCTAACATGTATTTGACTATTCTCATGGAGAGATCAGCTCTTTCATTAAGCCTTTTAAACCATTTACACTCCAATGTGGCTACACCTAAACTTGTTCTTCAGTTGATGGATGTTAAAGAGCTTACAATTTCATATGTCAAGAGCCATCTTCAGATGTACAGAAGCATGAGAGGTGAATTTGTCAGACAAGGTAGGACATCCTCCCATTCCCAACATAGGAACCAATCTTTTGAAGAGCATGATGATGGGTGTGTTGATGAAGTGAATGATGTTGGTATTCAGTACTCTTGTTCAAAACCCATTAGAAAAGAATCAGATTCCTCCTTCTGCTACAGCAACAACATCTCCTCAAAAAGGTACCGCCTTGGGATTAAATGA 462 0.3983 MTQRVKQYASLEERNWQKAMEFYGPKTHPNMYLTILMERSALSLSLLNHLHSNVATPKLVLQLMDVKELTISYVKSHLQMYRSMRGEFVRQGRTSSHSQHRNQSFEEHDDGCVDEVNDVGIQYSCSKPIRKESDSSFCYSNNISSKRYRLGIK. 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g04216 153 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 55 126 IPR044847 GO:0000976|GO:0006355|GO:0010158
Seca11g04216 153 Gene3D - 12 85 - -
Seca11g04216 153 NCBIfam myb-like DNA-binding domain, SHAQKYF class 47 83 IPR006447 GO:0003677
Seca11g04216 153 SUPERFAMILY Homeodomain-like 45 84 IPR009057 -
Seca11g04216 153 MobiDBLite consensus disorder prediction 90 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g04216 Seca-Chr11 119061368 119064056 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g04216 55 85 G2-like Transcription Factor Family AT1G14600 80.645 3.21e-10 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g04216 - - gmx:100787188 145.206