Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g04208 ATGGCTGGCCTATTTGATATGGTACAAAACATTTCTACTAAGAGAGACACATGGAGGCTCAAGGTTCGTGTTGCAAGACTGTGGAATATGACTCCCATAGATGACCGTTCTAATCCTTTCTCTGTCCAGATGATATTGGTCGATGCTAAGGGTGGAAGGATTCAAGCTAGCATTAAAAAACACATGATGAAAAGGTTTGCAAATTTAGTGGTTGAAGGGGCTGTCTACAAGATGGCATATTTTGGAGTGGTGCGCAACTTGGGCTCGTATGGAGGGACTGATCATGAATACAAATTGTTCTTTGATTCTAGGACAAGGATAATTCCTACGGAGATCGAACTCATTCCTAGGTTTGGACTTTCACTGAAGACTACCCAACGTATCCATGACACTAAAGGGAAGTCTGACCTTTTGATTGACTTTATGGGTGTTGTTCTTGATGTCTCTACTGAGAAACGTATACTTAAGGAGGGGAGACTCACGAGGGTTATTGTTCTGGAATTGGCATATGACAAGGGTACAATAAGGTGTTCTCTCTTTGGCGATTTTGTTGACGAGGTGACAAATTACCTTGTTGATGGCCTTACCCAGCTTCCAGTTGTGATAGTACAACTTGGGAGGGTCTCATCCTAG 633 0.4265 MAGLFDMVQNISTKRDTWRLKVRVARLWNMTPIDDRSNPFSVQMILVDAKGGRIQASIKKHMMKRFANLVVEGAVYKMAYFGVVRNLGSYGGTDHEYKLFFDSRTRIIPTEIELIPRFGLSLKTTQRIHDTKGKSDLLIDFMGVVLDVSTEKRILKEGRLTRVIVLELAYDKGTIRCSLFGDFVDEVTNYLVDGLTQLPVVIVQLGRVSS. 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g04208 210 SUPERFAMILY Nucleic acid-binding proteins 132 188 IPR012340 -
Seca11g04208 210 SUPERFAMILY Nucleic acid-binding proteins 8 110 IPR012340 -
Seca11g04208 210 Pfam Domain of unknown function DUF223 44 110 IPR003871 -
Seca11g04208 210 CDD RPA1_DBD_A_like 19 107 - -
Seca11g04208 210 Gene3D - 115 210 IPR012340 -
Seca11g04208 210 Gene3D - 5 109 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g04208 Seca-Chr11 118646417 118648498 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g04208 18 209 Core DNA Replication Machinery Family AT2G06510 24.138 3.42e-08 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g04208 - - lja:Lj0g3v0341019.1 192.971