Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g04206 ATGGCTACTATGTTTTCTGTAGGTTCAGGCTCTGCTTTTCTTTTTCATGGCACAGGCTTGTCCTTGGTAACCAAAGGACCACTCCTTCAGCTGAAGAGGCCTCTCTCTGCAAAGTCAGTTGCTTCTTTGGGAACAGAGACATCAGTGTCTCCAGCAGTTCAAACCTTCTGGAAGTGGATGCAGGAAGAAGGTGTTATCTCTTCCAAGACCCCTGTGAAGGCTGCTGTGGTTCCAGAAGGCCTGGGACTGATTGCCCTCAAAGACATTTCTAGGAATGGGGTTGTTTTGCAGGTACCCAAAAGGCTGTGGATCAACCCTGATGCAGTGGCAGCTTCAGAGATTGGGAATGTCTGTAGTGGTTTGAAGCCATGGTTGGCTGTTGCCCTCTTTCTGATTAGAGAGAGGTCAAGGGATGATTCTCGTTGGAAGCACTACTTCAGTATTCTGCCACAGGAAACTGATTCCACTATATATTGGTGGGTTTCTTTTGGTTTACTACTAAAACAAGGTACTCAACTTCTGAAAACAACACTCTCTGTGAAAGAATATGTGAAGAATGAATTTCTGAGACTGGAAGAAGAGATCATTCTCCCTAATAAGAAGCTTTTCCCTTCTCCTATAACACTGGATGACTTCTTCTGGGCATTTGGAATCCTCAGATCAAGGGCATTTTCTCGCCTCCGCAATGAAAATCTAGTTATAATTCCACTAGCAGACTTGATAAACCACAGTGCCAGAGTAACTACAGAAGATCATGCTCAAGAAGTTAAAGGACCAGCAGGCCTTTTCTCTTGGGATTACCTATTTTCCCTAAGGAGCCCCCTTTCTCTCAAGGCTGGGGACCAGGTTAAGTGTTGTTGCCTCCTCTCATGTTTCTTTTCATGTTCCATTTATGCTCAACAATGA 906 0.4459 MATMFSVGSGSAFLFHGTGLSLVTKGPLLQLKRPLSAKSVASLGTETSVSPAVQTFWKWMQEEGVISSKTPVKAAVVPEGLGLIALKDISRNGVVLQVPKRLWINPDAVAASEIGNVCSGLKPWLAVALFLIRERSRDDSRWKHYFSILPQETDSTIYWWVSFGLLLKQGTQLLKTTLSVKEYVKNEFLRLEEEIILPNKKLFPSPITLDDFFWAFGILRSRAFSRLRNENLVIIPLADLINHSARVTTEDHAQEVKGPAGLFSWDYLFSLRSPLSLKAGDQVKCCCLLSCFFSCSIYAQQ. 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g04206 301 SUPERFAMILY SET domain 50 286 IPR046341 -
Seca11g04206 301 Pfam SET domain 80 256 IPR001214 GO:0005515
Seca11g04206 301 FunFam Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic 49 286 - -
Seca11g04206 301 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 49 283 - -
Seca11g04206 301 ProSiteProfiles SET domain profile. 63 288 IPR001214 GO:0005515
Seca11g04206 301 Gene3D set domain protein methyltransferase, domain 1 48 290 - -
Seca11g04206 301 CDD SET_RBCMT 64 283 IPR044431 GO:0016279|GO:0018022
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g04206 Seca-Chr11 118619075 118622227 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g04206 48 243 NAC Transcription Factor Family AT3G56570 27.317 2.11e-09 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g04206 K00592 - gmx:100818113 450.284