Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g04161 ATGACTGCAGAGGATATGGAGAGTGAAAGCCAACTCCAAGTTTCAAATTCAGGACAACAAATTAAAGGAACCACTTTTTTCAAAACTTGTTTCAATGGACTCAACACCTTGGCAGGTATTGGAATACTGTCAATGCCGTATGCAGTTTCTCAAGGAGGGTGGTTGAGTTTTATCATGCTAATTATTTTTGCTATGATGTTTTGGTACACTGCTTTGCTTCTACAAAGGTGTATGAATAGACATCCACTAATCAAATCATATCCTGATATTGGTGAGGTTGCTTTTGGGTACAAAGGAAGAGCTCTGATTGCCACTATCATATATATAGAACTGTTTTTAATTGCAGTGGAGCTTCTTATATTAGAAGGTGACAATTTGGAGAAGCTGTTTCCAAATATGAACTTCAAAATTGTTGGCCATAAAATTGAAGCCAAAAGAAGTTTTGTCCTACTCGCTGCTTTGGTAATATTACCAACAACATGGTTGAGAAGCTTGGCAGCCCTGGCCTACATTTCTATTGGTGGGGTAGTGGCTTCCATTATTTTAATTGGTTGTGTTGTGTGGGTTGGTGAAGTTGATGGTGTTGGCTTTCATGAAAAAGGTCAGTTAGTAAATTGGGGAGGATTGCCTACTTCTGTGAGCCTTTTCTCCTTTTGTTACACTGCACATGCATTAATGCCTACACTATGCAATTCCATGAAGGATAGAAGTCAGTTTCCTAAGGTTCTGTTGGTTTGCTTTGTGACAGGCACCATTAACTTTGCATCTGTTGCTATTTTAGGCTACATGATGTTTGGAGATGATCTGAAGTCTCAAATCACCTTAAATCTACCAACAAAGAAAATAAGTACTAAAATAGCAATTTATACCACAGTAATCAATCCTTTCACTAAGTATGCTGTTTTAATCACCCCAATAGTGAATGCTATTGAAGATAAATGGCGACTTTGCAAGAGAAGACCTGTTTCCATCTTTATTAGAACAACCATTGTGGTCAGCAGTGCATTTGTGGCATTATTTGTTCCTTTTTTTGGATACATTATGGCGTTTATTGGTGCATTCCTGTGTGTGGCAATCTCATTGTTGTTCCCTTGTATTTGCTACCTGAAGATAAACAAAGCTGCTCGAATATTTGGGTTAGAGTTGATCATTATCACAGGAATTCTGCTCATAGGTACGGTAATTGGAATATTGGGTACCTACATCTCTGTGAGTCAGATAGTGAATCATATATGA 1236 0.3786 MTAEDMESESQLQVSNSGQQIKGTTFFKTCFNGLNTLAGIGILSMPYAVSQGGWLSFIMLIIFAMMFWYTALLLQRCMNRHPLIKSYPDIGEVAFGYKGRALIATIIYIELFLIAVELLILEGDNLEKLFPNMNFKIVGHKIEAKRSFVLLAALVILPTTWLRSLAALAYISIGGVVASIILIGCVVWVGEVDGVGFHEKGQLVNWGGLPTSVSLFSFCYTAHALMPTLCNSMKDRSQFPKVLLVCFVTGTINFASVAILGYMMFGDDLKSQITLNLPTKKISTKIAIYTTVINPFTKYAVLITPIVNAIEDKWRLCKRRPVSIFIRTTIVVSSAFVALFVPFFGYIMAFIGAFLCVAISLLFPCICYLKINKAARIFGLELIIITGILLIGTVIGILGTYISVSQIVNHI. 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g04161 411 Pfam Transmembrane amino acid transporter protein 23 406 IPR013057 -
Seca11g04161 411 PANTHER AMINO ACID TRANSPORTER 15 394 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g04161 Seca-Chr11 116368430 116371545 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g04161 7 411 Amino Acid or Auxin Permease AAAP Family AT3G28960 46.324 5.45e-141 406
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g04161 K15015 - gmx:100812006 621.698