Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g04160 ATGGACAGAGAAAGCCAACTCCAAGCTTCAAATTCAGGGCAACAAAGTAAAGGAACCACTTTCTTCAAAACTTGTTTCAATGGACTCAACTCCTTAGCAGGTATTGGGATACTGTCAATGCCATATGCAGTTTCTCAAGGAGGGTGGCTGAGTTTTATGCTGCTAATTATTTTTGCCATGATATGTTGGTACACAGCGTTACTTTTGCAAAGGTGTATGAATAGACATCCACTGATCAAATCCTACCCTGATATTGGTGAGGTTGCTTTTGGGTACAAAGGAAGAGCTGTGGTAGCCATTTTCATATATGTAGAGCTGTTTTTAATTGCTGTGGAACTTCTTATACTTGAAGGTGACAATTTGGATAAATTGTTTCCAAATATGAATTTCAAAATAGCTGGCATTAGAATTGGAGGTAAAAAAGGTTTTGTCCTGCTTGCTGCTTTGATAATATTACCAACAACATGGTTGAGAAGCTTGGGAGCTCTGGCCTATATTTCTGTTGGTGGGGTAGTGGCTTCTATTATTTTAATTGGTTGTGTTGTGTGGGTGGGTGAAGTTGATGGTGTTGGGTTTCATGAAAGAGGCCAATTAGTAAATTGGGAAGGATTGCCTACAGCTATGAGCCTTTTTGCATTCTGTTACTGTGCACATGCAGTAATGCCCACACTATGCAATTCCATGAATGATAGAAGTCAATTTTCCAAGGTTTTGCTTGTTTGCTTTGGAACTAGCACCATTATCTATGGATCTGTGGCTATTTTAGGCTACAGCATGTTTGGAGATGAATTGAAATCTCAAATCACCTTAAATCTACCAACAAAGAAAATAAGTACTAAAATAGCCATCTATACCACAGTAATTAATCCTTTCACTAAGTATGCTGTTCTAATTACCCCAATAGTGAATGCTATTGAGGAGAAATGGCATCTTTGCAAGATCAGCAGGCCTGTTACCATGCTGGTTAGAACATCCATTGTGGTTTGCAGTGTATTCGTGGCACTATTCGTTCCATTTTTTGCATATATCATGGCGTTTATTGGTGCATTCATGAGTGTGGCAATCTCATTGTTGTTCCCTTGTATATGCTATCTGAAGATAAACAAAGCTGCTCAGCGATTTGGGATAGAATTGATCATCATTATAGGAATTCTGCTCATAGGTACAATAATTGGAATATTGGGTACCTATATCTCTGTGGGCCAGATAATAAGTCATATTTGA 1224 0.384 MDRESQLQASNSGQQSKGTTFFKTCFNGLNSLAGIGILSMPYAVSQGGWLSFMLLIIFAMICWYTALLLQRCMNRHPLIKSYPDIGEVAFGYKGRAVVAIFIYVELFLIAVELLILEGDNLDKLFPNMNFKIAGIRIGGKKGFVLLAALIILPTTWLRSLGALAYISVGGVVASIILIGCVVWVGEVDGVGFHERGQLVNWEGLPTAMSLFAFCYCAHAVMPTLCNSMNDRSQFSKVLLVCFGTSTIIYGSVAILGYSMFGDELKSQITLNLPTKKISTKIAIYTTVINPFTKYAVLITPIVNAIEEKWHLCKISRPVTMLVRTSIVVCSVFVALFVPFFAYIMAFIGAFMSVAISLLFPCICYLKINKAAQRFGIELIIIIGILLIGTIIGILGTYISVGQIISHI. 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g04160 407 PANTHER AMINO ACID TRANSPORTER 11 390 - -
Seca11g04160 407 Pfam Transmembrane amino acid transporter protein 18 394 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g04160 Seca-Chr11 116272432 116275167 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g04160 1 407 Amino Acid or Auxin Permease AAAP Family AT3G28960 47.561 1.49e-142 410
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g04160 K15015 - gmx:100812006 616.305