Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g04086 ATGAATGGTTTCAGTGCAAGTTTGTCACCAACAGAGCTCGAAGCTCTGAAAAGCTCTCCCGGTTACATTTCATCCACACAAGATTTTCCTGTCAAGCTTCACACAACACACTCACCTCAGTTCCTTGGTCTCAATCCCCACAAAGGGGCATGGCCCGCTGCTGAATTTGGCAAAGATGTAATCATTGGTTTGGTGGACACTGGAGTTTGGCCAGAAAGTGAAATCTTCAGAGATAATGGGATGACTGAAATTCCTTCAAGATGGAAAGGCCAATGTGAAAATAGCATCCAATTTAACTCATCTCTATGCAACAAGAAACTCATAGGAGCAAGGTTCTTTAACAAAGGATTTCTAGCCACATACCCCAGAGACAGAAATGGTCACGGGACTCACACATCATCCATCGCAGCTGGGAGCAGAGTTGAGGGTGCATCCTACTTTGGCTATGCCACAGGATCAGCAACAGGAATTGCTTCAGGGGCTAAGATAGCCATGTACAAGGCCATTTGGGATATTAGAGCTGTGTCATCTGATATAATAGCTGCAATCGATTGTGCAATTTCAGATGGGGTAGATGTTCTTTCCTTATCAATTGGAATGGTAAATCCAAATTTGTACAAAGACCCTATTGCAATAGCCACATTTGCAGCAGTGGAGAAAGGTATTTTTGTGTCTGCATCAGCAGGGAACGATGGTCCCTCCTTTGAAACTCTGAATAATGATGCACCATGGTTGACGACCGTGGCTGCAGGCACTATAGATCGAGAATTTAATGGCACTCTTACGCTTGGAAATGGTGTCTCAATCTCTGGGTTAACTTTCTATCTAGGAAACAACTCTGCCAATGTTCCAATTGTTTTCATTTCTAGAGGGCCATCAACGACGATTCCATTTGCGTTGAAACCAGATATCACAGCTCCTGGTACTAAAATCTTAGCTGCATGGCCTCCAAATATTCCAGATCTCTATAACAAGTTCAATTTTTTAAGTGGGACATCCATGGCGTCCCCTCATGTTGCAGGGGTGGGAGCACTTTTAAGAGGTGCACACTCTGATTGGAGCCCTGCAGCTATTCGATCAGCCATTATGACAACATCGGACATATTTGACAACACAATGGGATTCATCAAAGACATTGGTAAAGGTTACCAAACAGCCTCTCCTCTAGCCATGGGAGCTGGTTATGTAAACCCCAACAGAGCCCTTGACCCTGGACTTGTTTATGATGCACAGGTACAAGATTATGTGAATCTTCTCTGTGCAATGAACTTCACCCAAGAGAACATCACAGCCATAACTAGATCCTCTTCTTATAATTGCTCTAATCCTCTTTTGGATCTCAACTACCCTTCTTTTATTGCTTTCTTCAATGCGAACAATAATTCTTCAGGGATAATACAAGAATTTCAGAGAACGGTGACAAATGTTGGGGAGGGAGATACGACCTATGTTGCTAGTGTTACTCCCATCAATGGGTTCCATATTAGCGTCATCCCCAACAAGTTGGTGTTCAAAGGGAAGAACGAGAAGCTAAGCTACAAGTTGAGGATCAAAGGCACAAAAGTGACAAAAGAGATTAATGAAGTAAATTTTGGGTATCTCACTTGGACGGATGTGAAGCATTTTGTTACGAGCCCTGTTGTGATCACTACCCTCAAATTTAAATCATAG 1671 0.4297 MNGFSASLSPTELEALKSSPGYISSTQDFPVKLHTTHSPQFLGLNPHKGAWPAAEFGKDVIIGLVDTGVWPESEIFRDNGMTEIPSRWKGQCENSIQFNSSLCNKKLIGARFFNKGFLATYPRDRNGHGTHTSSIAAGSRVEGASYFGYATGSATGIASGAKIAMYKAIWDIRAVSSDIIAAIDCAISDGVDVLSLSIGMVNPNLYKDPIAIATFAAVEKGIFVSASAGNDGPSFETLNNDAPWLTTVAAGTIDREFNGTLTLGNGVSISGLTFYLGNNSANVPIVFISRGPSTTIPFALKPDITAPGTKILAAWPPNIPDLYNKFNFLSGTSMASPHVAGVGALLRGAHSDWSPAAIRSAIMTTSDIFDNTMGFIKDIGKGYQTASPLAMGAGYVNPNRALDPGLVYDAQVQDYVNLLCAMNFTQENITAITRSSSYNCSNPLLDLNYPSFIAFFNANNNSSGIIQEFQRTVTNVGEGDTTYVASVTPINGFHISVIPNKLVFKGKNEKLSYKLRIKGTKVTKEINEVNFGYLTWTDVKHFVTSPVVITTLKFKS. 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g04086 556 Gene3D Peptidase S8/S53 domain 35 418 IPR036852 GO:0004252|GO:0006508
Seca11g04086 556 Pfam Fibronectin type-III domain 446 549 IPR041469 -
Seca11g04086 556 FunFam Subtilisin-like protease SBT1.5 59 263 - -
Seca11g04086 556 PRINTS Subtilisin serine protease family (S8) signature 124 137 IPR015500 -
Seca11g04086 556 PRINTS Subtilisin serine protease family (S8) signature 57 76 IPR015500 -
Seca11g04086 556 PRINTS Subtilisin serine protease family (S8) signature 330 346 IPR015500 -
Seca11g04086 556 Pfam Subtilase family 57 367 IPR000209 GO:0006508|GO:0008236
Seca11g04086 556 Gene3D - 419 552 - -
Seca11g04086 556 CDD Peptidases_S8_3 31 367 IPR034197 -
Seca11g04086 556 SUPERFAMILY Subtilisin-like 33 406 IPR036852 GO:0004252|GO:0006508
Seca11g04086 556 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 1 268 IPR045051 -
Seca11g04086 556 ProSitePatterns Serine proteases, subtilase family, serine active site. 331 341 IPR023828 -
Seca11g04086 556 ProSiteProfiles Serine proteases, subtilase domain profile. 30 402 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g04086 Seca-Chr11 113432997 113435044 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g04086 287 552 Subtilisin-like Serine Gene Family AT5G67090 44.086 9.76e-61 212
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g04086 - - cic:CICLE_v10018512mg 461.07