Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g04052 ATGAAGCACATGACTAGACAAGAATTTGTGGCCGCCATAAGAAGGCATCACCAACATGGAAGATGGCAAGCAAGGATTGGCAGGGTTGCAGGAAACAAAGATCTATATTTAGGAACTTTCACAATAAAGTTCAGAGGTCTTAATGTCGTAGTGAGCCGCTTCAGTGCCTTCGAGAGCCTCCATGAGACGACTGAGGTTCAGGGACGGTGA 210 0.4667 MKHMTRQEFVAAIRRHHQHGRWQARIGRVAGNKDLYLGTFTIKFRGLNVVVSRFSAFESLHETTEVQGR. 70
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g04052 69 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1 49 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g04052 Seca-Chr11 110728031 110728648 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g04052 1 54 AP2-EREBP Transcription Factor Family AT5G57390 54.545 1.09e-22 87.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g04052 K09285 - thj:104816905 86.2705