Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g04049 ATGTGCTTTTTGATGGATCCTCAAACTGGGAAGAAGGTCTGCTATGTCCAGTTTCCTCATAGAGTTGATGGTATTGATACTCATGATCATTATGCCAACAGGAACACAGTTTTCTTTGATATTAACATAAAGGGTCTAGATGGTATTCAGGGTCCTGTATATGTGGGGATAGGATGTGTTTTCAGGAGGCAAGATTTGTATGGTTATAATCCTCCTAGGAGGCAAAATATGTTTCACACACACACACACACTCATATGACAAAAATTACATATGGCAAATGTGTTGTATAA 291 0.378 MCFLMDPQTGKKVCYVQFPHRVDGIDTHDHYANRNTVFFDINIKGLDGIQGPVYVGIGCVFRRQDLYGYNPPRRQNMFHTHTHTHMTKITYGKCVV. 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g04049 96 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 1 80 - -
Seca11g04049 96 Pfam Cellulose synthase 1 82 IPR005150 GO:0016020|GO:0016760|GO:0030244
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g04049 Seca-Chr11 110594086 110594485 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g04049 1 73 Cell Wall Biosynthesis AT5G17420 84.932 1.05e-43 148
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g04049 K10999 - gmx:100815436 148.673