Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g03996 ATGACTAACGGAAGGTGGAGATTGTGGAGGACACGAGAGTTACAGCAAGAAGAAGTGCTACAGGACCTGCCTAAAGCAATTAGATCCAATATTGCTCAACATCTTTTCCATAACATAGTTGCAAATGCATATTTATTTAACGGAGTTTCTGATGATTTTGTCACCCACCTGGTGTTAGAAATGAAAGCAGAACCATCTAAGGTTCACATCATCCTGCAAAATGAGGTGCCAGCATATTTCTACATTTTAGTCTCTGGATCAGTGGTAAAACATCTATATCTTATTCAAATCCTATCCCTATGTACAATGTCCCCATGTCGTGGTGCCTCCTAG 333 0.4024 MTNGRWRLWRTRELQQEEVLQDLPKAIRSNIAQHLFHNIVANAYLFNGVSDDFVTHLVLEMKAEPSKVHIILQNEVPAYFYILVSGSVVKHLYLIQILSLCTMSPCRGAS. 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g03996 110 SUPERFAMILY cAMP-binding domain-like 8 89 IPR018490 -
Seca11g03996 110 Gene3D Jelly Rolls 13 92 IPR014710 -
Seca11g03996 110 PANTHER POTASSIUM CHANNEL AKT1 10 89 IPR045319 GO:0005249|GO:0006813
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g03996 Seca-Chr11 106205035 106205479 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g03996 9 88 Ion Channels AT4G32650 57.317 1.30e-25 97.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g03996 K21867 - csin:114306787 115.546