Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g03969 ATGGCGCAGAGTGAGGTGAAGCTTATTGGCAAATGGTCCAGTCCTTACGTGATGAGGGCGAAGATTTCCCTCAACATCAAATCCCTTGAATATGAAAATTTTGAAGAGAACGAGACCTTGAACCCCAAAAGTGATCTTCTTCTTCAATCCAACCCTGTGCATGGCAAAGTCCCTGTTCTCATCCACCATGGCAAACCCATCTGTGAGTCTTTGATCATAGTTGAATACATAGACGAAACTTGGTCCACTGGTCCTTCTATTTTCCCCTCTGATGCTTATGATAGAGCAATTGCTCGGTTCTGGGCTTCTTACATAGACCAAAAGTGGTTTCCTTCATTGGAAAGCATTATAGCTGTTGAATCAGAGGAGGAAAGGAAGCCATTATATGAGGTGATGGAAGAAGTGGTTGAGAGGATGGAGGATGCTTTTGAGAAATGCAGCAAAGGAAAGCCCTTTTTTGGTGGAGATAGTATTGGTTTCCTTGATATTGCTTTTGGGTGCTTCTTGGGATGGGTGAGAGTGTTAGAGCATATGTATGAAAGGAAAGTGCTGGATGAAGCAAAGGCTCCTTCTTTGGTGAAATGGGCTGAGAGATTTGCTGCTGACCCTGCTGTGAAGGGCCTTATTCCTGAGACTGACAGGCTTCTTAGGCTTGCTAAGATTTTTCAGATCAAATGGAGAGCTGCTATTGCCAAGAAGAAATAG 705 0.4383 MAQSEVKLIGKWSSPYVMRAKISLNIKSLEYENFEENETLNPKSDLLLQSNPVHGKVPVLIHHGKPICESLIIVEYIDETWSTGPSIFPSDAYDRAIARFWASYIDQKWFPSLESIIAVESEEERKPLYEVMEEVVERMEDAFEKCSKGKPFFGGDSIGFLDIAFGCFLGWVRVLEHMYERKVLDEAKAPSLVKWAERFAADPAVKGLIPETDRLLRLAKIFQIKWRAAIAKKK. 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g03969 234 Pfam Glutathione S-transferase, C-terminal domain 102 203 IPR004046 -
Seca11g03969 234 SFLD Glutathione Transferase (cytosolic) 2 228 IPR040079 -
Seca11g03969 234 SUPERFAMILY GST C-terminal domain-like 87 220 IPR036282 -
Seca11g03969 234 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 4 85 IPR004045 -
Seca11g03969 234 Gene3D - 88 230 - -
Seca11g03969 234 CDD GST_N_Tau 6 81 - -
Seca11g03969 234 Gene3D Glutaredoxin 1 87 - -
Seca11g03969 234 Pfam Glutathione S-transferase, N-terminal domain 5 79 IPR004045 -
Seca11g03969 234 SUPERFAMILY Thioredoxin-like 6 110 IPR036249 -
Seca11g03969 234 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 91 222 IPR010987 -
Seca11g03969 234 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 9 214 IPR045073 -
Seca11g03969 234 FunFam Glutathione S-transferase U9 88 229 - -
Seca11g03969 234 SFLD Main.3: Omega- and Tau-like 2 228 IPR045073 -
Seca11g03969 234 FunFam Glutathione S-transferase GSTU6 1 87 - -
Seca11g03969 234 CDD GST_C_Tau 92 222 IPR045074 GO:0004364|GO:0006749
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g03969 Seca-Chr11 105104871 105106363 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g03969 1 220 Glutathione S-transferase Gene Family AT1G10370 60.181 8.91e-93 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g03969 K00799 - cam:101508281 373.629