Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Seca11g03967 | ATGACAAAGACAAAGAGTGAGGTAAAGCTGTTGGGGGCATGGCAAAGTCCATTTGCGTTGAGAGCTCAGATAGCTCTTAACATCAAATCAGTGGAATATGAGTTCATTGAGGAATCATTTGAGCCGAAAAGCCAGCTTCTTCTTCAAACCAACCCTGTTTTCAAAAAAGTTCCTGTTCTCTTTCACAGGGACAAATCCATTTGCGAGTCTTTGGTCGTTGTGGAGTATGTGGATGAGGCCTGGTCCTTTGCCACTCCCATTCTCCCTTCTGATCCTTATGACCGCGCCATTGCTCGCTTCTGGGCTACCTATATTGATGACAAGTGGTACCCGACAATGAGATCCATTAGAGGAGCAAAAGGAGAGGATGAGAGGCAGAGATTGATAGAGGAAGTGAGAGAAGGATTGGCGTTGCTGGAGGATGCTTTTAAGAAGAGCAGCAAAGGCAAGGCCTTTTTCGGTGGTGACCAAATTGGGTTCCTAGATATTGTACTTGGTAGCTTCTTGGGGTGGCTTAGAGTGGTGGAGATAGCCAATGGGGTGAAATTGCTTGACCAAGACAACGCACCTGGGCTGGTGAAATGGGCTGAAAAGTTCTGCGCACATACTTCTGTCAAAGATATTATGCCAGAGACAGGGAAGCTTCATGAGTTTGCTAAGTTTCTATGGGCCAAGATGGATGCTTCTACTCCAAAATAA | 699 | 0.4592 | MTKTKSEVKLLGAWQSPFALRAQIALNIKSVEYEFIEESFEPKSQLLLQTNPVFKKVPVLFHRDKSICESLVVVEYVDEAWSFATPILPSDPYDRAIARFWATYIDDKWYPTMRSIRGAKGEDERQRLIEEVREGLALLEDAFKKSSKGKAFFGGDQIGFLDIVLGSFLGWLRVVEIANGVKLLDQDNAPGLVKWAEKFCAHTSVKDIMPETGKLHEFAKFLWAKMDASTPK. | 233 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Seca11g03967 | 232 | FunFam | Glutathione S-transferase GSTU6 | 3 | 88 | - | - | |
| Seca11g03967 | 232 | SFLD | Glutathione Transferase (cytosolic) | 5 | 227 | IPR040079 | - | |
| Seca11g03967 | 232 | CDD | GST_N_Tau | 8 | 81 | - | - | |
| Seca11g03967 | 232 | SFLD | Main.3: Omega- and Tau-like | 5 | 227 | IPR045073 | - | |
| Seca11g03967 | 232 | FunFam | Glutathione S-transferase U9 | 88 | 229 | - | - | |
| Seca11g03967 | 232 | Pfam | Glutathione S-transferase, C-terminal domain | 100 | 201 | IPR004046 | - | |
| Seca11g03967 | 232 | Gene3D | Glutaredoxin | 1 | 87 | - | - | |
| Seca11g03967 | 232 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 6 | 85 | IPR004045 | - | |
| Seca11g03967 | 232 | Pfam | Glutathione S-transferase, N-terminal domain | 7 | 79 | IPR004045 | - | |
| Seca11g03967 | 232 | Gene3D | - | 88 | 232 | - | - | |
| Seca11g03967 | 232 | SUPERFAMILY | Thioredoxin-like | 8 | 111 | IPR036249 | - | |
| Seca11g03967 | 232 | PANTHER | GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING | 10 | 215 | IPR045073 | - | |
| Seca11g03967 | 232 | SUPERFAMILY | GST C-terminal domain-like | 87 | 221 | IPR036282 | - | |
| Seca11g03967 | 232 | ProSiteProfiles | Soluble glutathione S-transferase C-terminal domain profile. | 91 | 222 | IPR010987 | - | |
| Seca11g03967 | 232 | CDD | GST_C_Tau | 92 | 222 | IPR045074 | GO:0004364|GO:0006749 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Seca11g03967 | Seca-Chr11 | 105093896 | 105095177 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Seca11g03967 | 6 | 228 | Glutathione S-transferase Gene Family | AT1G10370 | 57.589 | 5.57e-93 | 270 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Seca11g03967 | K00799 | - | adu:110272419 | 352.058 |