Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g03951 ATGAACGTTGATTTGGAATCGTTGGCAGAGGCAACCTCGGGAGCCATAGGATCACTTCTGAGTACTACCATCTTGTACCCTCTTGACACCTGCAAGACCAAGTTCCAAGCTGAGGTTCCTTCCAATGGCCAAAGAAAATACAGGAACCTCTCTGATGTGTTATGGGAAGCAATATCTACTGGTCAGGTGGTTTCACTTTACCAGGGCCTAGGAACCAAAAATCTCCAATCTTTTGTTTCACAGTTTGTCTACTTCTATGGCTACAGCTACTTTAAAAGACTGTACCTTGATAAAAGTGGTTTTAAATCCATTGGAACCAAAGCAAACTTGGTAATTGCTGATGCTGCTGGGGCCTGCACAGCCATTGTGACTCAGCCCCTGGATACAGCCTCTTCAAGGATGCAGACAAGTGCTTTTGGAAAGTCTAAAGGGCTATTGAAGACCCTTGCAGAAGGCACTTGGAGTGATGCATATGATTGCCTCAGCATTTCCTTGTTGCTGACCTCAAACCCTGCAATTCAGTATACAGTGTTTGATCAGCTGAAACAACGAGCACTGAGGAATATACAACACAAAGATGATAATAGATCATCTCCAGCATCTCTTCCTGCATTTATGGCCTTTCTTCTTGGTGCTATTTCAAAGAGTGCTGCTACCTTTCTAACATATCCTGCTATCAGGTGCAAGGTGATGATTCAAGCTGCTGACTCAGATGAACAAAGCTCCAAAACAAAGGCAAAACCACAGAAAACAGTGTCTGGAGTTCTCTATGCAATATGGAAAAGGGAGGGTATAATAGGATTTTTCAAAGGATTGCAGGCTCAGATTTTAAAAACAGTTTTGAGCTCAGCACTGCTTTTAATGATCAAGGAGAAAATTTCTGCCTCTTCTTGGTTTCTTATACTTGCTGTTAGAAGGTATCTTTTGCTCCCAAGGGGTAGAGTCAAAAACTTATAA 957 0.4232 MNVDLESLAEATSGAIGSLLSTTILYPLDTCKTKFQAEVPSNGQRKYRNLSDVLWEAISTGQVVSLYQGLGTKNLQSFVSQFVYFYGYSYFKRLYLDKSGFKSIGTKANLVIADAAGACTAIVTQPLDTASSRMQTSAFGKSKGLLKTLAEGTWSDAYDCLSISLLLTSNPAIQYTVFDQLKQRALRNIQHKDDNRSSPASLPAFMAFLLGAISKSAATFLTYPAIRCKVMIQAADSDEQSSKTKAKPQKTVSGVLYAIWKREGIIGFFKGLQAQILKTVLSSALLLMIKEKISASSWFLILAVRRYLLLPRGRVKNL. 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g03951 318 Pfam Mitochondrial carrier protein 105 184 IPR018108 -
Seca11g03951 318 Pfam Mitochondrial carrier protein 6 98 IPR018108 -
Seca11g03951 318 Pfam Mitochondrial carrier protein 202 293 IPR018108 -
Seca11g03951 318 Gene3D Mitochondrial carrier domain 5 297 IPR023395 -
Seca11g03951 318 ProSiteProfiles Solute carrier (Solcar) repeat profile. 5 94 IPR018108 -
Seca11g03951 318 PRINTS Mitochondrial carrier protein signature 20 38 IPR002067 GO:0055085
Seca11g03951 318 PRINTS Mitochondrial carrier protein signature 67 85 IPR002067 GO:0055085
Seca11g03951 318 PRINTS Mitochondrial carrier protein signature 113 135 IPR002067 GO:0055085
Seca11g03951 318 FunFam Peroxisomal adenine nucleotide carrier 1 3 297 - -
Seca11g03951 318 PANTHER PEROXISOMAL ADENINE NUCLEOTIDE TRANSPORTER 1 1 317 IPR045900 GO:0005347|GO:0006635|GO:0015217
Seca11g03951 318 ProSiteProfiles Solute carrier (Solcar) repeat profile. 202 296 IPR018108 -
Seca11g03951 318 SUPERFAMILY Mitochondrial carrier 7 292 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g03951 Seca-Chr11 104326562 104329221 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g03951 23 285 Chloroplast and Mitochondria Gene Families AT1G25380 28.070 6.35e-13 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g03951 - - gmx:100301879 516.538