Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g03948 ATGAGCAGTTTTCAACTCCAAGGTCCTTGCAGTGGTGGGTATCACAATGCTAGAAGGGTAGCGAGGGCCTCGATTTCTGATAAATTAAGGTACCTACAATGGGATGGATTTACTTCAAGGTCTCTACCGCTAACATTTTGTCCGGAGAAGCTTGTTGAGCTTTCCATGCGAGACAGCCAGCTTGAGAAACTTTGGGATGGAGTGCAGGATTTGGAGAATTTAAAAAGAGTAGATCTTCGTGGATCCAAAAGGTTGATTGAACTCCCAGATTTCTCTCTGTCGTCAAATCTTGAAGAAGTAAATCTCTCCGAGTGTGAAAGTTTGTGTCGTGTTCATCCATCTCTCTTGTCTCTCCCCTCACTTGTTTCTTTGAATGTATCTTCGTGCATAACCATTAAGCGTTTGCCTGCAAGCATCAACCAGCTTCCAAAGCTGAAATATCTTGACTTAAGAGATTGCAAGAGGCTTGATTCCCTGCCAGAACTTCCACAGTCAATTAAAGAGATATATCTAAGTGGAAGCAATATTAAGTGTTTGCCTGCAAGCATCAACCAGCTTCCAAAGCTGAAATTTCTTGACTTAAGAGATTGCAAGAGGCTTCAGTCCCTGCCAGAACTTCCACAATCAATTGATGTTATAAATCTAAGAGGAAGCAATATTAAGTGCTTGTCTGCAAGCATCAACTAG 687 0.4192 MSSFQLQGPCSGGYHNARRVARASISDKLRYLQWDGFTSRSLPLTFCPEKLVELSMRDSQLEKLWDGVQDLENLKRVDLRGSKRLIELPDFSLSSNLEEVNLSECESLCRVHPSLLSLPSLVSLNVSSCITIKRLPASINQLPKLKYLDLRDCKRLDSLPELPQSIKEIYLSGSNIKCLPASINQLPKLKFLDLRDCKRLQSLPELPQSIDVINLRGSNIKCLSASIN. 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g03948 228 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 24 213 IPR044974 GO:0006952
Seca11g03948 228 SUPERFAMILY L domain-like 25 225 - -
Seca11g03948 228 Gene3D Ribonuclease Inhibitor 167 228 IPR032675 -
Seca11g03948 228 Gene3D Ribonuclease Inhibitor 23 166 IPR032675 -
Seca11g03948 228 Pfam Leucine Rich Repeat 50 69 IPR011713 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g03948 Seca-Chr11 104266315 104267081 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g03948 28 204 WRKY Transcription Factor Family AT4G12020 36.757 3.01e-27 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g03948 - - lang:109349632 201.06