Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g03936 ATGGTTGTGGCTGAGTATGCAGTGGGGCTTGAAGATCGAGTTGGGAAGGTGATGGAGCTTTTACAAGTTGAATCCAATGGTGTTAGAGTTTTGGGGCTGTATGGGATGGGTGGGGTTGGTAAGACAACCCTGGCCAAGGCTCTTTTCAATAGCCTTGTTGGTCGTTTTGAGCGTCGCTGCTTCATTTCAAATGTCAAACAATATTCATCCAAAGATGGTGGTTTGGTTTCTCTTCAAAGCAAAATCATTAGCGATCTTTCCCCTGAAGAAGGGTCAAGAGTTCATACCAGTGATGTTAATGTTGGTATTAGACGAGTACTTCGTGAAAATCGAGTTTTGCTAGTCTTGGATGATGTTGATGATATAAACCAACTTGATGCTTTGATTGGTAAGAGGGAATGGTTTTATGAAGGAAGCCGTGTAATAATTACCACAAGGGATAAACATGTTTTGCCCCAGAATCATGTCAATGAGTTGTTTGAAGTTAAAGAATTGTATCCTTCTGAAGCTCTAGAGTTATTCAGTTACCATGCACTGAGGAAGTTTCTAACGATGATAACTTCTCAAAATCATCTGGAATCCTTTCGGATATTCCCCAAGCACGGGCATCAAGCTCATATAGCAAGGTCAGATTGCCGAAGGAAGTTTCTCTGGTTATTTTCAGATTTGTATTGCACCAGAGGACCAACATAA 693 0.4113 MVVAEYAVGLEDRVGKVMELLQVESNGVRVLGLYGMGGVGKTTLAKALFNSLVGRFERRCFISNVKQYSSKDGGLVSLQSKIISDLSPEEGSRVHTSDVNVGIRRVLRENRVLLVLDDVDDINQLDALIGKREWFYEGSRVIITTRDKHVLPQNHVNELFEVKELYPSEALELFSYHALRKFLTMITSQNHLESFRIFPKHGHQAHIARSDCRRKFLWLFSDLYCTRGPT. 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g03936 230 PRINTS Disease resistance protein signature 106 120 - -
Seca11g03936 230 PRINTS Disease resistance protein signature 30 45 - -
Seca11g03936 230 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 8 181 IPR044974 GO:0006952
Seca11g03936 230 Pfam NB-ARC domain 11 181 IPR002182 GO:0043531
Seca11g03936 230 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 4 180 IPR027417 -
Seca11g03936 230 Gene3D - 3 159 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g03936 Seca-Chr11 103707413 103708105 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g03936 8 178 WRKY Transcription Factor Family AT5G45050 32.749 5.89e-25 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g03936 - - mtr:11408681 247.669